CN192471

Overview
NameCN192471
Unique NameCN192471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.912e-48
Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNRQISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            +SPPS G FK   R  ++P+I FL  N++PLLVNLYPYFAI  N  I L+YALF S + VV+D    YRNLFDA LDATY+ALEKA G SL+IV+SES WP+AG  G LT++DNARTYNNNLI HVK GSPK+P  PIETY+FA
Sbjct:  166 TSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFAIANNADIKLEYALFTSSEVVVNDNGRGYRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGA-GQLTSIDNARTYNNNLISHVKGGSPKRPSGPIETYVFA 308          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.114e-47
Identity = 97/151 (64.24%), Postives = 115/151 (76.16%), Query Frame = 1
Query:    4 GALEVSSPPSAGSFKQAYR-PILDPVITFLNENKSPLLVNLYPYFAIDGN-RQISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            GAL  S PPS GSFK  YR   LD VI FL  N +PL+VN+Y YFA   N + ISLDYALFRS   VV D  L YRNLFDA +DA YAALEKAGGGSL+IV+SES WP++GG    T++DNARTYN NL+++VKQG+PK+PG P+ETY+FA
Sbjct:  167 GALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYALFRSPSVVVQDGSLGYRNLFDASVDAVYAALEKAGGGSLNIVVSESGWPSSGGTA--TSLDNARTYNTNLVRNVKQGTPKRPGAPLETYVFA 315          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.760e-47
Identity = 95/150 (63.33%), Postives = 111/150 (74.00%), Query Frame = 1
Query:    4 GALEVSSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNRQ-ISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            G L  + PPS GSFK  Y  +L P+I FL  ++SPLLVNLYPYFA  GN Q I LDYALF +   VV D    YRNLFDA LD  YAALEKAGGGSL +VISE+ WP+A G    T +DNART+ +NLIQHVK+G+P++PGRPIETYIFA
Sbjct:  172 GVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYALFTAPSVVVQDGNFGYRNLFDAMLDGVYAALEKAGGGSLKVVISETGWPSAAGTA--TTIDNARTFISNLIQHVKEGTPRRPGRPIETYIFA 319          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 6.799e-46
Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            +SPPS G F+  Y+  L+PVI FL   +SPLLVNLYPYF+  G+   I LDYALF +Q  V +DP  SY+NLFDA LD+ YAALEK+GGGSL+IV+SE+ WPT G  G  T+V+NA+TY NNLIQHVK GSP++PG+ IETYIFA
Sbjct:  166 TSPPSQGRFRDEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQSTVDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPTEGAVG--TSVENAKTYVNNLIQHVKNGSPRRPGKAIETYIFA 308          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 7.779e-42
Identity = 86/145 (59.31%), Postives = 103/145 (71.03%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGN-RQISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R  +DP+I F+    SPLLVN+YPYF+  GN R ISL YALF +   VV D  L YRNLFDA  DA YAAL +AGGGS++IV+SES WP+AG     TN  NA TY  NLIQHVK+GSP++P + IETY+FA
Sbjct:  174 SFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALFTAPNVVVQDGSLGYRNLFDAMSDAVYAALSRAGGGSIEIVVSESGWPSAGAFAATTN--NAATYYKNLIQHVKRGSPRRPNKVIETYLFA 316          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E131_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 1 (Fragment) OS=Solanum tuberosum GN=GLUB1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 2.263e-41
Identity = 86/145 (59.31%), Postives = 103/145 (71.03%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R   DP++ FL + ++PLLVN+YPYF+  GN  QISL YALF +   VV D    YRNLFDA LD+ YAA+E+ GGGS+ IV+SES WP+AG  G     DNA TY  NLIQH K+GSP+KPG PIETYIFA
Sbjct:  142 SYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNAVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFG--ATQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFA 283          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.956e-41
Identity = 86/145 (59.31%), Postives = 103/145 (71.03%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R   DP++ FL + ++PLLVN+YPYF+  GN  QISL YALF +   VV D    YRNLFDA LD+ YAA+E+ GGGS+ IV+SES WP+AG  G     DNA TY  NLIQH K+GSP+KPG PIETYIFA
Sbjct:  133 SYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFG--ATQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFA 274          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.123e-40
Identity = 85/145 (58.62%), Postives = 104/145 (71.72%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R  +DP++ FL + ++PLLVN+YPYF+  GN  QISL Y+LF +   VV D    YRNLFDA LD+ YAALE++GG S+ IV+SES WP+AG  G     DNA TY  NLIQH K+GSP+KP RPIETYIFA
Sbjct:  176 SYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFG--ATYDNAATYLKNLIQHAKEGSPRKP-RPIETYIFA 317          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E132_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 2 OS=Solanum tuberosum GN=GLUB2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.123e-40
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R   DP++ FL + ++PLLVN+YPYF+  GN  QISL YALF +   VV D    YRNLFDA LD+ YAA+E+ GGGS+ IV+SE  WP+AG  G     DNA TY  NLIQH K+GSP+KPG PIETYIFA
Sbjct:  168 SYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSECGWPSAGAFG--ATQDNAATYLRNLIQHAKEGSPRKPG-PIETYIFA 309          
BLAST of CN192471 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.467e-40
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 1
Query:   19 SSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGNR-QISLDYALFRSQQPVVSDPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESAWPTAGGDGPLTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFA 450
            S PPS GSF+   R   DP++ FL + ++PLLVN+YPYF+  GN  QISL Y+LF +   VV D    YRNLFDA LD+ YAALE++GG S+ IV+SES WP+AG  G     DNA TY  NLIQH K+GSP+KPG PIETYIFA
Sbjct:  176 SYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTAPNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAGAFG--ATYDNAATYLRNLIQHAKEGSPRKPG-PIETYIFA 317          
The following BLAST results are available for this feature:
BLAST of CN192471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13H_TOBAC1.912e-4865.28Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13A_SOYBN2.114e-4764.24Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13B_PRUPE2.760e-4763.33Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13A_ARATH6.799e-4662.76Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
GUB_NICPL7.779e-4259.31Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E131_SOLTU2.263e-4159.31Glucan endo-1,3-beta-glucosidase, basic isoform 1 ... [more]
E133_SOLTU2.956e-4159.31Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]
E13B_NICPL1.123e-4058.62Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E132_SOLTU1.123e-4058.62Glucan endo-1,3-beta-glucosidase, basic isoform 2 ... [more]
E13F_TOBAC1.467e-4058.62Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P04_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192471 ID=CN192471; Name=CN192471; organism=Citrus sinensis; type=EST; length=451bp
GAGGGAGCTCTTGAAGTATCCTCTCCGCCGTCAGCAGGCTCCTTTAAGCA
AGCTTACAGACCAATTCTTGATCCCGTCATTACCTTCCTCAACGAAAACA
AATCCCCGTTGCTTGTTAACTTGTACCCTTACTTCGCAATTGATGGCAAC
CGTCAAATATCTCTTGATTATGCACTGTTTCGGTCCCAACAACCGGTTGT
TTCGGACCCTCCGTTGAGTTACCGGAATCTTTTTGATGCCCAGTTGGATG
CCACTTATGCTGCGTTGGAAAAAGCCGGTGGGGGCTCGTTGGATATTGTG
ATATCGGAGAGTGCGTGGCCAACGGCGGGTGGTGACGGACCGTTAACGAA
TGTTGATAATGCAAGGACTTATAATAATAACTTGATACAGCATGTGAAGC
AAGGGTCACCAAAGAAACCTGGCAGGCCTATTGAGACTTACATTTTTGCT
A
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