CX302267

Overview
NameCX302267
Unique NameCX302267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX302267 vs. ExPASy Swiss-Prot
Match: BH144_ARATH (Transcription factor bHLH144 OS=Arabidopsis thaliana GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 2 
Query:   89 RQKLKKMVNVLRGFVPGGNELNTVGVLDEAVRHLKSLKVEVQNLGVGNMKN 241
            R+K+KKM+ VLR  VPGG ++NT  VLDEAV++LKSLK+E Q LGVG+  N
Sbjct:  199 RKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249
The following BLAST results are available for this feature:
BLAST of CX302267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH144_ARATH1.096e-1162.75Transcription factor bHLH144 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionC08018H09SK PhyRootSw1 Citrus sinensis cDNA clone C08018H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302267 ID=CX302267; Name=CX302267; organism=Citrus sinensis; type=EST; length=451bp
CACTTATGATTCAGAACCCCAACATAATAAGTTTTCTTCCATGCTGAAGT
CCTCTGGCAGTAGCAGCAAATGTCACAATGGGAAAAAACGTCAGAAATTG
AAGAAGATGGTAAATGTCTTGAGGGGTTTTGTGCCTGGCGGCAATGAGTT
GAACACTGTTGGTGTTCTGGATGAAGCTGTGAGGCACCTCAAGTCTCTCA
AGGTTGAAGTGCAGAATCTTGGAGTTGGGAATATGAAGAACTAAGCTTAG
TGCCATGCAATGGTAACATTGATGAGACTCTTTATTATAATTATGAGTTT
ATAAGTTATTAGTTAGTTTCTTGCCTCGCTCTCGGCAGGTCAACATTAGG
TCGATAATAATTTTGAGGGCGTATCTAGAACTTATGGTTGTGGCAGAGAT
ATGCAATTGTGTTTCTGTATTGAATTTGTTTCGAAAAAAAAAAAAAAAAA
A
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