CN192410

Overview
NameCN192410
Unique NameCN192410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3716 contig Csv1_Contig3716:220..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 222.246 bits (565), Expect = 9.949e-58
Identity = 111/147 (75.51%), Postives = 119/147 (80.95%), Query Frame = 3
Query:   57 DAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            DAEKL  LKSAVAGLNQISENEK+GFINLV RYLSGEAQH++WSKIQTPTDE+VVPYD LAP+ EDPAE                    MGCTGPKSVIEVRNGLTFLDLIV QIE LNAK+GC+VPLLLMNSFNTHDDT KI+EKY
Sbjct:   11 DAEKLNNLKSAVAGLNQISENEKSGFINLVGRYLSGEAQHIDWSKIQTPTDEVVVPYDKLAPLSEDPAETKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVKQIEALNAKFGCSVPLLLMNSFNTHDDTLKIVEKY 157          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 7.130e-56
Identity = 108/149 (72.48%), Postives = 119/149 (79.87%), Query Frame = 3
Query:   51 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            AT  ++L+ LKS+VAGLNQISENEK+GFINLVARYLSGEAQHVEWSKIQTPTDE+VVPYD+LAP P+   E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN+KYG NVPLLLMNSFNTHDDT  I+EKY
Sbjct:    4 ATATDRLSNLKSSVAGLNQISENEKSGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPYDTLAPTPDGSLEIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNSKYGSNVPLLLMNSFNTHDDTQTIVEKY 152          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 3.912e-54
Identity = 106/149 (71.14%), Postives = 116/149 (77.85%), Query Frame = 3
Query:   51 ATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            AT  EKL QLKSAV GL ++SENEK+GFINLV+RYLSGEAQH+EWSKIQTPTDEIVVPYD +A V ED +E                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KY C VPL+LMNSFNTHDDT KI+EKY
Sbjct:    3 ATATEKLPQLKSAVDGLTEMSENEKSGFINLVSRYLSGEAQHIEWSKIQTPTDEIVVPYDKMANVSEDASETKYLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYNCKVPLVLMNSFNTHDDTQKIVEKY 151          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 4.326e-53
Identity = 103/150 (68.67%), Postives = 116/150 (77.33%), Query Frame = 3
Query:   48 MATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            MA   E L QLKSAV GL ++SE+EK+GFI+LV+RYLSGEAQH+EWSKIQTPTDEIVVPY+ + PV +D AE                    MGCTGPKSVIEVR+GLTFLDLIVIQIENLN KYGC VPL+LMNSFNTHDDT KI+EKY
Sbjct:    1 MAATTENLPQLKSAVDGLTEMSESEKSGFISLVSRYLSGEAQHIEWSKIQTPTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY 150          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 7.379e-53
Identity = 106/142 (74.65%), Postives = 112/142 (78.87%), Query Frame = 3
Query:   75 QLKSAVAGLNQISENEKNGFINLVARYLSGE-AQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            +LKS VA L+QISENEKNGFINLV+RY+SGE AQHVEWSKIQTPTDE+VVPYD LAP PEDP E                    MGCTGPKSVIEVRNGLTFLDLIVIQIENLN KYG  VPLLLMNSFNTHDDT KI+EKY
Sbjct:   11 KLKSDVASLSQISENEKNGFINLVSRYVSGEEAQHVEWSKIQTPTDEVVVPYDGLAPTPEDPEEIKKLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIENLNNKYGSCVPLLLMNSFNTHDDTQKIVEKY 152          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.147e-52
Identity = 101/144 (70.14%), Postives = 114/144 (79.17%), Query Frame = 3
Query:   66 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            K+ +L+SAVA LNQISENEK+GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+L+P PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGCNVPLLLMNSFNTHDDT KI+EKY
Sbjct:    5 KIAKLQSAVAELNQISENEKSGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLSPPPEDLEATKKLLDKLAVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHDDTQKIVEKY 148          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 7.636e-50
Identity = 98/144 (68.06%), Postives = 110/144 (76.39%), Query Frame = 3
Query:   66 KLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            K+  L+ AVA L +ISENEK GFI+LV+RYLSGEA+ +EWSKIQTPTDE+VVPYD+LAP PED                       MGCTGPKSVIEVRNG TFLDLIVIQIE+LN KYGC+VPLLLMNSFNTHDDT KI+EKY
Sbjct:   11 KIDGLRDAVAKLGEISENEKAGFISLVSRYLSGEAEQIEWSKIQTPTDEVVVPYDTLAPPPEDLDAMKALLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGFTFLDLIVIQIESLNKKYGCSVPLLLMNSFNTHDDTQKIVEKY 154          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA1_YEAST (UTP--glucose-1-phosphate uridylyltransferase OS=Saccharomyces cerevisiae GN=UGP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.501e-21
Identity = 59/130 (45.38%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  114 ENEKNGFINLVARYLSGEAQH--VEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            ENE + F  L  RYL  ++    +EW KI++P  + VV Y+ ++  PE+ +                     MGC GPKSVIEVR G TFLDL V QIE LN +Y  +VPLLLMNSFNT  DT  +I+KY
Sbjct:   49 ENELDSFFTLFRRYLVEKSSRTTLEWDKIKSPNPDEVVKYEIISQQPENVSNLSKLAVLKLNGGLGTS----MGCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKY 174          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA2_DICDI (UTP--glucose-1-phosphate uridylyltransferase 2 OS=Dictyostelium discoideum GN=ugpB PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.560e-21
Identity = 61/168 (36.31%), Postives = 84/168 (50.00%), Query Frame = 3
Query:   24 PRLDRINHMATDAEKLTQLKSAVAGLNQISENE--KNGFIN--------LVARYLSGEAQHVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            P+L      ++D          +  ++Q + NE  KN F+N        L  R+L    + ++W KI  P  ++V+ Y  L  + E                        MGCTGPKSVIEVR+  TFLDL V QI+ +N +Y   VPL+LMNSFNTH +T KII+KY
Sbjct:   14 PQLQAFGSRSSDLATEDLFLKKLEAISQTAPNETVKNEFLNKEIPSINKLFTRFLKNRKKVIDWDKINPPPADMVLNYKDLPAITEQRTSELASKLAVLKLNGGLGTT--MGCTGPKSVIEVRSEKTFLDLSVQQIKEMNERYNIKVPLVLMNSFNTHQETGKIIQKY 179          
BLAST of CN192410 vs. ExPASy Swiss-Prot
Match: UGPA1_SCHPO (Probable UTP--glucose-1-phosphate uridylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1322.04 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.270e-20
Identity = 58/157 (36.94%), Postives = 85/157 (54.14%), Query Frame = 3
Query:   33 DRINHMATDAEKLTQLKSAVAGLNQISENEKNGFINLVARYLSGEAQ--HVEWSKIQTPTDEIVVPYDSLAPVPEDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIENLNAKYGCNVPLLLMNSFNTHDDTSKIIEKY 497
            + +NH+A+  +     K+         + E + F +L +RYL  +A+   + W  +++P  E VV YD++    E                        MGC GPKS+IEVR+G +FLDL V QIE+LN KY  NVP +LMNSFNT + T+K+I+KY
Sbjct:   35 NELNHLASTVKDPLAKKAF--------QKEMDNFFSLFSRYLQEDARGSEINWDLVESPKPEQVVEYDTIT---EAGGLSRDYLNKLAVLKLNGGLGTTMGCVGPKSIIEVRDGNSFLDLSVRQIEHLNRKYNVNVPFVLMNSFNTDEATAKVIKKY 180          
The following BLAST results are available for this feature:
BLAST of CN192410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
UGPA_SOLTU9.949e-5875.51UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN7.130e-5672.48UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA1_ARATH3.912e-5471.14UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA2_ARATH4.326e-5368.67Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_PYRPY7.379e-5374.65UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA_MUSAC2.147e-5270.14UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HORVU7.636e-5068.06UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA1_YEAST1.501e-2145.38UTP--glucose-1-phosphate uridylyltransferase OS=Sa... [more]
UGPA2_DICDI2.560e-2136.31UTP--glucose-1-phosphate uridylyltransferase 2 OS=... [more]
UGPA1_SCHPO1.270e-2036.94Probable UTP--glucose-1-phosphate uridylyltransfer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006N14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192410 ID=CN192410; Name=CN192410; organism=Citrus sinensis; type=EST; length=497bp
GAGGGTTCTTCTAGATTCATCTTCCTCGTTTAGACCGAATCAATCACATG
GCCACTGACGCCGAGAAGCTCACTCAGCTCAAATCTGCCGTTGCTGGCCT
CAATCAAATCAGTGAAAATGAGAAAAATGGATTCATCAACCTCGTTGCTC
GCTATCTAAGCGGCGAAGCGCAACACGTGGAATGGAGCAAAATCCAAACG
CCTACTGATGAAATCGTAGTTCCTTATGACAGCTTGGCACCAGTTCCTGA
AGATCCAGCGGAAACCAAAAAGCTTTTGGATAAGCTTGTCGTGTTGAAGC
TCAATGGAGGTTTGGGAACCACAATGGGCTGCACTGGTCCCAAGTCTGTT
ATTGAAGTTCGTAACGGGTTGACATTTCTTGACCTCATCGTCATCCAGAT
TGAGAATCTCAATGCTAAATATGGATGTAATGTTCCCCTGCTACTCATGA
ACTCGTTCAACACGCATGATGATACATCGAAGATTATAGAGAAGTAC
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