CN192403

Overview
NameCN192403
Unique NameCN192403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1717..2309. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50
Identity = 99/137 (72.26%), Postives = 111/137 (81.02%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG ++PKV PEV+ EHT  AL+R +PAAVPAVVF  GGQSEEEAT  LNA+NQ+K KKP +LSFS G A QQST KAW+GKEENV+ AQ A L R KAN  ATLG YKG+ QLGEGA+ES HVKDYKY
Sbjct:  223 TLLKPNMVTPGSDSPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 9.633e-49
Identity = 98/137 (71.53%), Postives = 110/137 (80.29%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG +A KV+PEVI E+T   L+R +PAAVPA+VF  GGQSEEEAT  LNAMN+L  KKP SLSFS G A QQST KAW+GK EN++KA+AAFL R KAN  ATLG YKGD  LGEGA+ES HVKDYKY
Sbjct:  222 TLLKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.373e-47
Identity = 97/137 (70.80%), Postives = 106/137 (77.37%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG +APKV PEVI EHT  AL+R +PAAVPAVVF  GGQSEEEA+  LNA+NQ+K KKP +LSFS G A QQST KAW GK ENV+ AQ A L R KAN  ATLG YKG   LG GA+ES HVKDYKY
Sbjct:  223 TLLKPNMVTPGSDAPKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.188e-44
Identity = 94/137 (68.61%), Postives = 104/137 (75.91%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG ++ KVTPEVI E+T   L+R +PAAVPAV+F  GGQSEEEATR LNAMN+L  KKP SLSFS G A Q ST KAWAGK EN++KA+AAFL R KAN  ATLG YKGD        ES HVKDYKY
Sbjct:  222 TLLKPNMVTPGSDSKKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGD---AAADTESLHVKDYKY 355          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.334e-41
Identity = 89/137 (64.96%), Postives = 100/137 (72.99%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            T LKPN+VTPG E+ KVTPEVI E+T   L+R +P AVP V+F  GGQSEEEAT  LNAMN+L+ KKP +LSFS G A QQST KAW GKEENV KAQ  FL R K N  ATLG Y+G    G  A+ES HVKDYKY
Sbjct:  222 TSLKPNIVTPGSESKKVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.809e-40
Identity = 88/137 (64.23%), Postives = 101/137 (73.72%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG ++PKV+PEVI E+T  AL+R +PAAVP +VF  GGQSEE+AT  LNAMN+    KP +LSFS G A QQST K W+GK+ENV KAQ  FL R KAN  ATLG Y G    G  A+ES HVKDYKY
Sbjct:  222 TLLKPNMVTPGSDSPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 9.352e-36
Identity = 80/137 (58.39%), Postives = 94/137 (68.61%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG ++PKV PE+I E+T  AL+R +P A+P +VF  G Q EE+AT  LNAMN+L   KP +L+FS GGA QQS  KAWAGK ENV KAQA FL R KAN  ATLG Y G       A E+  V  Y+Y
Sbjct:  222 TLLKPNMVTPGSDSPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27
Identity = 71/138 (51.45%), Postives = 85/138 (61.59%), Query Frame = -3
Query:  181 TLLKPNMVTPG-FEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG   A K + E I   T  AL+R +PAAVP + F  GGQSE +AT  LNA+N ++  KP  L+FS G A Q S  KAW GK+EN+  AQ   L R KAN  A+LG Y G+   G  AAES  V  + Y
Sbjct:  230 TLLKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 2.309e-26
Identity = 64/138 (46.38%), Postives = 84/138 (60.87%), Query Frame = -3
Query:  181 TLLKPNMVTPGFEAP-KVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVTPG   P K TPE I   T  AL+R +P AVP V F  GGQSEEEA+  LNA+N+    +P +L+FS G A Q S   AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+S ++ ++ Y
Sbjct:  227 TLLKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN192403 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.938e-26
Identity = 67/139 (48.20%), Postives = 85/139 (61.15%), Query Frame = -3
Query:  181 TLLKPNMVTPG--FEAPKVTPEVIVEHTFGALKRIMPAAVPAVVFFFGGQSEEEATRTLNAMNQLKRKKPGSLSFSLGGAFQQSTFKAWAGKEENVQKAQAAFLFRGKANFGATLGIYKGDPQLGEGAAESFHVKDYKY 591
            TLLKPNMVT G  F   K +   I   T  AL+R +P+AVP VVF  GGQSEE+AT  LNA+NQ+  KKP +L+FS G A Q S    WAGK+EN+  AQ   L R + N  A++G Y GD      A++S  V ++ Y
Sbjct:  228 TLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
The following BLAST results are available for this feature:
BLAST of CN192403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ALF_CICAR8.712e-5072.26Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ9.633e-4971.53Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF2_PEA2.373e-4770.80Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE4.188e-4468.61Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL4.334e-4164.96Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA2.809e-4064.23Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH9.352e-3658.39Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_CAEEL1.224e-2751.45Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOC_PANTR2.309e-2646.38Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALF1_CAEEL3.938e-2648.20Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006N11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006N11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192403 ID=CN192403; Name=CN192403; organism=Citrus sinensis; type=EST; length=593bp
TTTTTTTTTTTTTTTTTGAACAAAACCCCTCAAACCGAAATTCCCAAGCT
TTTTATTGCTCCCCCTAAATATGAAAAAGCTCTAAAACTTTGAATGAAAA
TGGGCCCACCTAATGTTCATACCCCCCTTTACTCTCATAAAGTTCATAAA
GCACAACACCCAAAGCTTCAACTGGGCTTAATATTTGTAGTCCTTGACAT
GGAAAGACTCTGCGGCACCTTCACCAAGCTGGGGATCCCCCTTGTAAATA
CCGAGGGTAGCCCCAAAATTGGCCTTGCCCCTGAAAAGGAAAGCAGCCTG
GGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGCCTTGAAAGTGCTCT
GCTGAAATGCACCTCCCAAGGAAAAAGAAAGTGACCCTGGCTTCTTCCTC
TTGAGCTGGTTCATGGCATTAAGGGTGCGGGTAGCCTCCTCCTCACTCTG
CCCACCAAAAAAAAACACAACCGCCGGAACTGCTGCCGGCATAATGCGTT
TCAGGGCCCCGAAAGTGTGTTCAACAATCACCTCCGGGGTAACTTTGGGA
GCTTCAAATCCAGGGGTCACCATGTTGGGCTTCAAAAGGGTAC
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