CN192389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.630e-55 Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVF PN+NSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D+AKYES ARSWTQKYA+G Sbjct: 39 GPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 3.630e-55 Identity = 99/110 (90.00%), Postives = 105/110 (95.45%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVF PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D+AKYE+ ARSWTQKYA+G Sbjct: 39 GPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 3.630e-55 Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+DK KYES ARSWTQKYA+G Sbjct: 39 GPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 6.192e-55 Identity = 99/110 (90.00%), Postives = 104/110 (94.55%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVF PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+DK KYES AR+WTQKYA+G Sbjct: 39 GPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.802e-54 Identity = 97/110 (88.18%), Postives = 105/110 (95.45%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVF PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D+AKYE+ AR+WTQKYA+G Sbjct: 39 GPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 6.846e-54 Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+ PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D+ KYES A+SWTQKYA+G Sbjct: 39 GPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 1.992e-53 Identity = 95/110 (86.36%), Postives = 105/110 (95.45%), Query Frame = -2 Query: 234 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYALG 563 GP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+ PNINSNGSICLDILKE WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D++KYES ARSWTQKYA+G Sbjct: 39 GPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 4.906e-52 Identity = 94/109 (86.24%), Postives = 101/109 (92.66%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP +SPY+GGVFLV IHFPPDYPFKPPKV FRTKVF PNINSNG+ICLDILK+ WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+DK KYE+ ARSWTQKYAL Sbjct: 39 GPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.575e-48 Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSPYAGGVF ++IHFP DYPFKPPKV F T+++ PNINSNGSICLDIL++ WSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH YK+D+++YE AR WT+KYA+ Sbjct: 39 GPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147
BLAST of CN192389 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.633e-47 Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = -2 Query: 237 GPFDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFPPNINSNGSICLDILKEPWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAHKYKSDKAKYESPARSWTQKYAL 563 GP DSPYAGGVF ++IHFP DYPFKPPK++F TK++ PNIN+NG+ICLDILK+ WSPALTLSKVLLSICSLLTD NPDDPLVPEIAH YK+D+ KYE+ AR WT+KYA+ Sbjct: 40 GPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV 148 The following BLAST results are available for this feature:
BLAST of CN192389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192389 ID=CN192389; Name=CN192389; organism=Citrus sinensis; type=EST; length=564bpback to top |