CN192387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_TOBAC (60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.044e-64 Identity = 127/154 (82.47%), Postives = 133/154 (86.36%), Query Frame = -1 Query: 122 MAP-KVDSSKKGDPXXXXXXXXXXXKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 580 MAP K D SKK DP KSG T KKK++K+RT VTFHRPKTLKKDRNPKYPRISAP RNKLD Y ILKYPLTTESAMKKIEDNNTLVFIVDI+ADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPRISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_FRIAG (60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.325e-64 Identity = 127/154 (82.47%), Postives = 133/154 (86.36%), Query Frame = -1 Query: 122 MAPKVDSSKKGDPXXXXXXXXXXXKSG-PTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 580 MAP +KK D KSG T +KKAKK+RTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIK AVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALD+ANKIGII Sbjct: 1 MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: R23A1_ARATH (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA PE=2 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.507e-63 Identity = 125/154 (81.17%), Postives = 132/154 (85.71%), Query Frame = -1 Query: 122 MAP-KVDSSKKGDPXXXXXXXXXXXKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 580 M+P KVD++KK DP KSG FKKK KK+RT VTFHRPKTL K R KYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_DAUCA (60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.276e-62 Identity = 125/154 (81.17%), Postives = 132/154 (85.71%), Query Frame = -1 Query: 122 MAP-KVDSSKKGDPXXXXXXXXXXXKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 580 M+P KVD +KK D KSG T KK KK+RTSVTFHRP+TL KDRNPKYPRISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+K+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: R23A2_ARATH (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.666e-62 Identity = 124/154 (80.52%), Postives = 130/154 (84.42%), Query Frame = -1 Query: 122 MAP-KVDSSKKGDPXXXXXXXXXXXKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 580 M+P KVD +KK DP KSG KK AKK+RT VTFHRPKTL R PKYP+ISA PRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADK+KIKDAVKKMY+IQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Sbjct: 1 MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_RAT (60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = -1 Query: 122 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 484 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_MOUSE (60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = -1 Query: 122 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 484 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_HUMAN (60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = -1 Query: 122 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 484 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL23A_BOVIN (60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 8.028e-49 Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = -1 Query: 122 KAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 484 K KK+RTS TF RPKTL+ R PKYPR SAP RNKLDHY I+K+PLTTESAMKKIEDNNTLVFIVD++A+K +IK AVKK+Y+I KVNTLIRPDG KKAYVRL PDYDALDVANKIGII Sbjct: 36 KKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156
BLAST of CN192387 vs. ExPASy Swiss-Prot
Match: RL25_PUCGR (60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.717e-41 Identity = 81/125 (64.80%), Postives = 100/125 (80.00%), Query Frame = -1 Query: 122 TFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 496 T K +++RTSVTF RPKTL+ R PKYPR S P ++D Y+ L PL TESAMKKIEDNNTL+FIVD++A+KR+I DAVKK+Y++ +VNTLIRPDG KKA+VRLTP+ DALD+ANKIG I Sbjct: 34 TSSKTQRRIRTSVTFRRPKTLRLSRKPKYPRTSVPHAPRMDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158 The following BLAST results are available for this feature:
BLAST of CN192387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192387 ID=CN192387; Name=CN192387; organism=Citrus sinensis; type=EST; length=619bpback to top |