CN192374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192374 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.160e-20 Identity = 50/83 (60.24%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 110 DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQF 358 D D +IRQV G + +L +E HFSLFK+KF K YAS EEHD RF++FKANLRRA R QKLDPSATHGVTQF Sbjct: 27 DGDDLVIRQVVGGAEP----------QVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQF 99
BLAST of CN192374 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.160e-18 Identity = 44/85 (51.76%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 107 IDDVDQLIRQVTDGGDEILSHHESTNNDL-LGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQF 358 +D D LIRQV GGD+ NDL L AE HF F ++F K+Y +EH R ++FK NLRRA R Q LDPSA HGVT+F Sbjct: 21 VDAEDPLIRQVVPGGDD---------NDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKF 96 HSP 2 Score: 32.7278 bits (73), Expect = 1.160e-18 Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 Query: 363 DLTPAEFRRTYLGL 404 DLTPAEFRRTYLGL Sbjct: 98 DLTPAEFRRTYLGL 111
BLAST of CN192374 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.314e-18 Identity = 47/82 (57.32%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 113 DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQF 358 D D LIRQV D T +L +E HF+LFKKKF K Y S EEH RF++FKANL RA R QK+DPSA HGVTQF Sbjct: 25 DEDVLIRQVVD----------ETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQF 96 HSP 2 Score: 22.7126 bits (47), Expect = 4.314e-18 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3 Query: 363 DLTPAEFRRTYLGL 404 DLT +EFRR +LG+ Sbjct: 98 DLTRSEFRRKHLGV 111
BLAST of CN192374 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.871e-16 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 2 Query: 119 DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQF 358 D +IRQV D ++ LL AEHHF+ FK KF+K+YA++EEHD RF +FK+NL +A Q DP+A HG+T+F Sbjct: 27 DFIIRQVVDNEED----------HLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKF 96 HSP 2 Score: 25.0238 bits (53), Expect = 2.871e-16 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 363 DLTPAEFRRTYLGLWRK 413 DLT +EFRR +LGL ++ Sbjct: 98 DLTASEFRRQFLGLKKR 114 The following BLAST results are available for this feature:
BLAST of CN192374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192374 ID=CN192374; Name=CN192374; organism=Citrus sinensis; type=EST; length=415bpback to top |