CN192372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.382e-21 Identity = 52/142 (36.62%), Postives = 86/142 (60.56%), Query Frame = 3 Query: 213 ESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVLFAFIISFTCQ 638 ESK LW ++ +I ++ ++ V+ F GH+G+ QLA S+ + A GI+LGMASA++T+CGQA+GA+QY +GI QR+ ++ A+ L L++++ PIL +GQ IA + +IP ++AF ++ Q Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQ 192
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14 Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 201 KLWVESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVL 608 ++W E+++L +AAPA ++ F I++VS F GH+G +L A SL T++ + G+A A +TL Q FG ++GI LQR ++L + L T+ IL+ Q+ ++++ L+ +P L Sbjct: 44 EVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPAL 179
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.830e-14 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 213 ESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVL 608 E+ L +A P + F I++VS F GH+G +L A +L +V+ + G+ASA +TL Q+FG K +G+ LQR ++L +C +F T+ +L+ L Q+ ++A +A ++ IP L Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPAL 174
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.863e-13 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 213 ESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVL 608 E +L +A P ++ F I+ VS F GH+G T+LA +L V+ I G+ASA +TL Q FG+ +G+ LQR ++L + L T+PIL+A+ Q N+A ++ + +P L Sbjct: 52 EIVELLKLAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPAL 183
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.090e-11 Identity = 38/139 (27.34%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 207 WVESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVLFAFII 623 W E++ L++++ P + +F VV F GH+G +LA+ +L + + G++SA +TL Q+FG+ +G+ LQR ++L +C + LF T+ IL+ Q+ ++ + +++ IP L A + Sbjct: 57 WDEARALFVLSGPLFLFQVLNFLTYVVGTVFCGHLGKVELASVTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFL 195
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11 Identity = 51/150 (34.00%), Postives = 74/150 (49.33%), Query Frame = 3 Query: 84 TTDERKAFFLEVRMAGEIKEKLLGNTEEND-----VDGQVKFRHKLWVESKKLWI-VAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLF 515 TT RK R A ++ L TEEN+ + Q F K W + L I A P + T +G V + +GH+G T+LAA SL A I G+ SAL+T+ Q+FG+ Y M+G++LQR +L I ++ P+F Sbjct: 47 TTSLRKPTPRVQRPATDVSYGALEETEENESIASGLSVQEDFNSKAWWKELTLLIKFATPVVLTSLLQYGEVVTTVFSLGHLGKTELAAASLSNMTATITAFAIYQGIVSALDTVGTQSFGSGNYEMVGLHLQR---ILAILLLIQFPIF 193
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.144e-11 Identity = 39/139 (28.06%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 192 FRHKLWVESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVL 608 F ++W L+ ++ P + +F I +VS F GH+G +LA+ +L + + +G++SA +TL Q+FG+ +G+ LQR +VL +C + LF T+ IL+ Q+ +++ + ++ IP L Sbjct: 27 FGTEMWT----LFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPDVSRLTQDYVMIFIPGL 161
BLAST of CN192372 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11 Identity = 39/139 (28.06%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 192 FRHKLWVESKKLWIVAAPAIFTRFSSFGINVVSQAFIGHVGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAILLLPLFFFTKPILVALGQEENIAEVAGTISLMLIPVL 608 F ++W L+ ++ P + +F I +VS F GH+G +LA+ +L + + +G++SA +TL Q+FG+ +G+ LQR +VL +C + LF T+ IL+ Q+ ++ + ++ IP L Sbjct: 27 FGTEMWT----LFALSGPLFLFQVLTFMIYIVSTVFCGHLGKVELASVTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGL 161 The following BLAST results are available for this feature:
BLAST of CN192372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192372 ID=CN192372; Name=CN192372; organism=Citrus sinensis; type=EST; length=639bpback to top |