CN192369

Overview
NameCN192369
Unique NameCN192369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1756..2424. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 5.995e-56
Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = -3
Query:  296 APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 667
            A KV+P+VIAE+TVR LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+AAFL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  235 AKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.477e-54
Identity = 104/124 (83.87%), Postives = 116/124 (93.55%), Query Frame = -3
Query:  296 APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 667
            +PKV P+V+AEHTVRALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ A L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  236 SPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.021e-52
Identity = 102/124 (82.26%), Postives = 111/124 (89.52%), Query Frame = -3
Query:  296 APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 667
            APKV P+VIAEHTVRALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ A L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  236 APKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.404e-51
Identity = 102/122 (83.61%), Postives = 110/122 (90.16%), Query Frame = -3
Query:  296 KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 661
            KVTP+VIAE+TVR LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+AAFL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  237 KVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.087e-47
Identity = 95/122 (77.87%), Postives = 105/122 (86.07%), Query Frame = -3
Query:  296 KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 661
            KVTP+VIAE+TVR LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  237 KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = -3
Query:  296 APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 667
            +PKV+P+VI E+TV AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  235 SPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.316e-38
Identity = 79/124 (63.71%), Postives = 95/124 (76.61%), Query Frame = -3
Query:  296 APKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 667
            +PKV P++IAE+TV AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  235 SPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31
Identity = 68/122 (55.74%), Postives = 83/122 (68.03%), Query Frame = -3
Query:  296 KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 661
            K TP  +A  TV AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q AF+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  243 KYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.717e-31
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = -3
Query:  296 TVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 631
            TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  255 TVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CN192369 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = -3
Query:  296 AEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 640
            A  TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  250 ARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
The following BLAST results are available for this feature:
BLAST of CN192369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ5.995e-5685.48Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR1.477e-5483.87Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA4.021e-5282.26Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE3.404e-5183.61Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL5.087e-4777.87Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA8.121e-4572.58Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH4.316e-3863.71Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOB_DANRE3.913e-3155.74Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALF1_CAEEL8.717e-3158.93Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_ECHMU7.380e-3059.13Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0006M11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006M11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192369 ID=CN192369; Name=CN192369; organism=Citrus sinensis; type=EST; length=669bp
TTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATTATGTGCCATAT
CACAGAAATTTAGTGCCATTAGGGGAAAGGAAAAAATTAGAAAAACAAAA
ACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAAC
CGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAA
AACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCT
CATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATT
TGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCA
TCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGAC
AAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATG
CCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGAC
CATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGC
CTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTG
CAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGTCC
GGTGTAACTTTGGGAGCTT
back to top