CN192364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 9.974e-49 Identity = 84/101 (83.17%), Postives = 98/101 (97.03%), Query Frame = 2 Query: 2 RESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 ++S+YEGGVWKIRVELPDAYPYKSPS+GF+ KIYHPNVDEMSGSVCLDVINQ+WSPMFDL+N+FE+FLPQLLLYPNPSDPLNG+AA+LMM+DR Y+Q+VK Sbjct: 40 KDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 2.902e-48 Identity = 83/101 (82.18%), Postives = 98/101 (97.03%), Query Frame = 2 Query: 2 RESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 ++SLY+GGVWKIRVELPDAYPYKSPS+GF+ KIYHPNVDE+SGSVCLDVINQ+WSPMFDL+N+FE+FLPQLLLYPNPSDPLNG+AA+LMM+DR Y+Q+VK Sbjct: 40 KDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 5.473e-47 Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 2 Query: 2 RESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 ++S+Y+GGVWK+RVEL +AYPYKSPSIGF NKIYHPNVDEMSGSVCLDVINQ+WSPMFDL+NIFE FLPQLLLYPNPSDPLNG+AASLMM+D+ Y+ KVK Sbjct: 40 KDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVK 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 7.148e-47 Identity = 82/100 (82.00%), Postives = 95/100 (95.00%), Query Frame = 2 Query: 5 ESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 +SLY+GGVWKI+VELP+AYPYKSPS+GFVNKIYHPNVDE SG+VCLDVINQ+WSPMFDL+N+FESFLPQLLLYPNPSDP NG+AASL+M+DR Y+ KVK Sbjct: 41 DSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVK 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.444e-39 Identity = 69/97 (71.13%), Postives = 86/97 (88.66%), Query Frame = 2 Query: 14 YEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 YEGGVWK+RV+LPD YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP DPLNGDAA++ + ++Y QK+K Sbjct: 46 YEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIK 142
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.444e-39 Identity = 69/97 (71.13%), Postives = 86/97 (88.66%), Query Frame = 2 Query: 14 YEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 YEGGVWK+RV+LPD YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP DPLNGDAA++ + ++Y QK+K Sbjct: 46 YEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIK 142
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.444e-39 Identity = 69/97 (71.13%), Postives = 86/97 (88.66%), Query Frame = 2 Query: 14 YEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 YEGGVWK+RV+LPD YP+KSPSIGF+NKI+HPN+DE SG+VCLDVINQ+W+ ++DL NIFESFLPQLL YPNP DPLNGDAA++ + ++Y QK+K Sbjct: 46 YEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIK 142
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 3.216e-39 Identity = 69/100 (69.00%), Postives = 87/100 (87.00%), Query Frame = 2 Query: 5 ESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 E+ Y GG+WK+ VELP YP+KSPSIGFVN+I+HPN+DE+SGSVCLDVINQ+WSPMFD++NIFE FLPQLL YPN SDPLNG+AA+L++++ Y KV+ Sbjct: 41 ETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVR 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 1.652e-35 Identity = 63/101 (62.38%), Postives = 84/101 (83.17%), Query Frame = 2 Query: 2 RESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 +++ YE GVW++ VELPD YPYKSPSIGFVNKI+HPN+D SGS+CLDVIN +WSP++DL+NI E +P LL PN SDPLN +AA+L ++D+K Y++K+K Sbjct: 40 KDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIK 140
BLAST of CN192364 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.972e-18 Identity = 37/100 (37.00%), Postives = 69/100 (69.00%), Query Frame = 2 Query: 5 ESLYEGGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLLNIFESFLPQLLLYPNPSDPLNGDAASLMMKDRKQYDQKVK 304 +S++EG +K+ ++ + YP +P++ F++K++HPNV GS+CLD++ WSP++D+ I S + LL PNP+ P N ++A L +++++Y++KVK Sbjct: 45 DSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNV-YADGSICLDILQNQWSPIYDIAAILTS-IQSLLCDPNPNSPANSESARLFRENKREYNRKVK 142 The following BLAST results are available for this feature:
BLAST of CN192364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192364 ID=CN192364; Name=CN192364; organism=Citrus sinensis; type=EST; length=433bpback to top |