CN192347

Overview
NameCN192347
Unique NameCN192347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2774 contig Csv1_Contig2774:1412..1963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 8.246e-81
Identity = 135/154 (87.66%), Postives = 147/154 (95.45%), Query Frame = 1
Query:   91 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRXNGSSKLDDW 552
            MG+ ETDPL+QL+LPPGFRFYPTDEEL+VQYLCRK AG  FSLQ+I EIDLYKFDPWVLP+KA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII+TEG++VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR NGS+KLDDW
Sbjct:    1 MGIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDW 154          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 2.399e-80
Identity = 134/154 (87.01%), Postives = 146/154 (94.81%), Query Frame = 1
Query:   91 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRXNGSSKLDDW 552
            MG+ E DPL+QL+LPPGFRFYPTDEEL+V+YLCRK AG  FSLQ+I EIDLYKFDPWVLPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK+I+TEGR+VGIKKALVFY+GKAPKGTKTNWIMHEYRL EPSR NGS+KLDDW
Sbjct:    1 MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDW 154          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 3.134e-80
Identity = 137/154 (88.96%), Postives = 145/154 (94.16%), Query Frame = 1
Query:   91 MGVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRXNGSSKLDDW 552
            MGV E DPL+QL+LPPGFRFYPTDEELLVQYLCRKVAG HFSLQ+IG+IDLYKFDPW LPSKA+FGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIT +GR+VGIKKALVFY GKAPKGTKTNWIMHEYRL E SR +GSSKLDDW
Sbjct:    1 MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDW 154          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.159e-58
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 1
Query:   94 GVPETDPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEG--RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE----PSRXNGSSKLDDW 552
            G    D  ++LNLPPGFRF+PTDEEL+V YLCRKVA Q   + II E+DLYK DPW LP KA+FG KEWYFF+PRDRKYPNGSRPNR AG GYWKATG DK +  +G  R VGIKKALVFY GKAP+G KT+WIMHEYRL +    P    GS KLD+W
Sbjct:    9 GSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEW 167          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.416e-56
Identity = 104/147 (70.75%), Postives = 115/147 (78.23%), Query Frame = 1
Query:  124 LNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSR----XNGSSKLDDW 552
            L LPPGFRF+PTDEEL++ YLCRK A Q  ++ II EIDLYK+DPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFY GKAPKG KTNWIMHEYRL +  R       S +LDDW
Sbjct:    5 LQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLP-KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDW 150          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.121e-56
Identity = 102/146 (69.86%), Postives = 116/146 (79.45%), Query Frame = 1
Query:  124 LNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE---PSRXNGSSKLDDW 552
            L LPPGFRF+PTDEEL++ YLCR+ AG   ++ II EIDLYKFDPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK + +  + V IKKALVFY GKAPKG KTNWIMHEYRL +    +R   S +LDDW
Sbjct:    7 LQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSP-KPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDW 151          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.265e-53
Identity = 95/153 (62.09%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  109 DPLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFE-----PSRXNGSSKLDDW 552
            D  + LNLPPGFRF+PTDEEL+  YLC + AG+   + II E+DLY+ DPW LP +A+FG +EWYFF+PRDRKYPNGSRPNR A SGYWKATG DK +   GR  GIKKALVFY GK P+G KT WIMHEYRL +      +   G+ +LDDW
Sbjct:   10 DAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDW 162          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.265e-53
Identity = 98/150 (65.33%), Postives = 116/150 (77.33%), Query Frame = 1
Query:  118 SQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRXNGSSK-----LDDW 552
            ++LNLP GFRF+PTDEEL+  YLCR+ A +  ++ +I EIDLYKF+PW LP  A++GEKEWYFFS RDRKYPNGSRPNR AG+GYWKATG DK I  + + +GIKKALVFY GKAPKG KTNWIMHEYRL    R   ++K     LDDW
Sbjct:   46 AELNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDW 194          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.621e-52
Identity = 100/159 (62.89%), Postives = 117/159 (73.58%), Query Frame = 1
Query:  112 PLSQLNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK-IITTEG---RKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEP--------SRXNGSSKLDDW 552
            P  Q NLPPGFRF+PTDEEL++ YL RK       + II ++DLYKFDPW LP+KA FGE+EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDK +I+T G   +KVG+KKALVFY GK PKG K++WIMHEYRL +              S +LDDW
Sbjct:   11 PPPQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDW 169          
BLAST of CN192347 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.158e-52
Identity = 96/153 (62.75%), Postives = 111/153 (72.55%), Query Frame = 1
Query:  124 LNLPPGFRFYPTDEELLVQYLCRKVAGQHFSLQIIGEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLFEPSRXNGSSK----------LDDW 552
            L LPPGFRF+PTD+EL++ YLCRK  G   +  +I E+DLYKF+PW LP +A+ GEKEWYFFSPRDRKYPNG RPNR AG+GYWKATG DK + +  R V IKKALVFY GK PKG KTNWIMHEYRL +  R   + K          LDDW
Sbjct:    7 LQLPPGFRFHPTDDELVMYYLCRKCGGLPLAAPVIAEVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSP-RAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDW 158          
The following BLAST results are available for this feature:
BLAST of CN192347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC19_ARATH8.246e-8187.66NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH2.399e-8087.01NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH3.134e-8088.96NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC68_ORYSJ1.159e-5867.30NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC2_ARATH2.416e-5670.75NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC48_ORYSJ4.121e-5669.86NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC67_ORYSJ3.265e-5362.09NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NA102_ARATH4.265e-5365.33NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC18_ARATH1.621e-5262.89NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC71_ORYSJ6.158e-5262.75NAC domain-containing protein 71 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006L23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192347 ID=CN192347; Name=CN192347; organism=Citrus sinensis; type=EST; length=552bp
GAGGCATTTCTCCCTCTGCTTGTCCCCATAGCTTTAGCTCAGCATCTTCA
TCTATATCTTTTATTCGCAATTCATTTGAAAGCTTGAAAAATGGGCGTAC
CGGAGACGGACCCGCTCTCACAATTGAACTTACCTCCGGGTTTTCGGTTT
TACCCGACTGATGAGGAACTTCTAGTTCAATATCTCTGTCGCAAAGTTGC
AGGGCAACATTTTTCGCTGCAAATTATCGGTGAAATAGATTTGTACAAGT
TTGACCCATGGGTTCTACCAAGCAAGGCAATTTTTGGTGAGAAAGAATGG
TACTTTTTCAGCCCCAGGGATAGAAAATATCCAAACGGGTCCCGACCCAA
CAGAGTAGCCGGGTCCGGGTATTGGAAGGCCACAGGCACCGACAAGATTA
TCACAACTGAAGGTCGTAAGGTTGGTATCAAAAAGGCTCTTGTTTTTTAC
GTAGGCAAAGCTCCAAAAGGCACCAAAACCAATTGGATCATGCACGAATA
TCGACTCTTTGAACCTTCTCGCNAAAATGGCAGCTCAAAGTTAGATGATT
GG
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