EY691903

Overview
NameEY691903
Unique NameEY691903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11106 contig Csv1_Contig11106:213..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.036e-42
Identity = 81/82 (98.78%), Postives = 82/82 (100.00%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYETTARSWTQKYAMG
Sbjct:   67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41
Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG
Sbjct:   67 VAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.968e-41
Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD++KYE+TARSWTQKYAMG
Sbjct:   67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.570e-41
Identity = 79/82 (96.34%), Postives = 81/82 (98.78%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE TAR+WTQKYAMG
Sbjct:   67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 78/82 (95.12%), Postives = 82/82 (100.00%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD++KYE+TAR+WTQKYAMG
Sbjct:   67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 78/82 (95.12%), Postives = 82/82 (100.00%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            V+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE+TARSWTQKYAMG
Sbjct:   67 VSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.847e-40
Identity = 76/82 (92.68%), Postives = 81/82 (98.78%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            VAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YKTDR KYE+TA+SWTQKYAMG
Sbjct:   67 VAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTD++KYE  ARSWTQKYA+
Sbjct:   67 VVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35
Identity = 67/81 (82.72%), Postives = 77/81 (95.06%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAM 245
            V F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTDRS+YE +AR WT+KYA+
Sbjct:   67 VNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147          
BLAST of EY691903 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.753e-35
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 3
Query:    3 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG 248
            V F+TKV+HPNI+S GSICLDILKEQWSPA T SKVLLSICSLLTDPNP+DPLVPEIAH+YK D+SKYE+TA+ WTQKYAMG
Sbjct:   68 VNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYAMG 149          
The following BLAST results are available for this feature:
BLAST of EY691903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
UBC4_SOLLC3.036e-4298.78Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC28_ARATH1.154e-4196.34Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH1.968e-4196.34Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC8_ARATH2.570e-4196.34Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC9_ARATH4.384e-4195.12SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC11_ARATH4.384e-4195.12Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH4.847e-4092.68Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH5.926e-3888.89Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC4_SCHPO1.236e-3582.72Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]
UBC12_ARATH2.753e-3582.93Probable ubiquitin-conjugating enzyme E2 12 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-102-A06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY691903 ID=EY691903; Name=EY691903; organism=Citrus sinensis; type=EST; length=598bp
AGGTTGCATTCAGAACAAAAGTCTTCCATCCTAACATCAATAGCAACGGT
AGCATTTGCCTTGATATATTAAAAGAACAGTGGAGCCCTGCCCTTACCAT
ATCAAAGGTGCTGCTTTCTATTTGTTCACTGTTAACGGACCCGAACCCTG
ATGATCCATTGGTGCCAGAGATTGCCCACATGTACAAGACTGACCGGAGC
AAGTATGAAACAACTGCGAGGAGCTGGACCCAGAAGTATGCAATGGGTTA
GGTCACTGCTATCTCTCTGTCTCAAGGGAGGGCTTTCCCCAGGGCTTTGG
TCTTTAAAACTATTTATGTATGAACAAGAAGTGTGAGATGTCTCCTCATA
CAAGTGGTACCAGAGGGGAAGAATTATAATTAAGGCCTAGAAACAACAAC
ATTCACTGCTTTTAATTGTTTGTATGCAAATTTATCTTTTCATGCTTGGA
CGGTCTCTATTGTCATTAGCATCACCCTCTTAGCTGGTTTCTAACGAACC
CTGGGCCGTGATGTTTTTACTGTTTTGAGTGATCTTAGTTCTTACCTGAA
TTAAATTGTCACCATCTCTTGCCACTGAAAAAAAAAAAAAAAAAGGGG
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