CN192324

Overview
NameCN192324
Unique NameCN192324
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:923..1620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.362e-61
Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKGDDLFV HTLSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHFSV+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  265 RKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.839e-59
Identity = 108/125 (86.40%), Postives = 116/125 (92.80%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKGDDLF  HTLSLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  246 RKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.708e-59
Identity = 106/125 (84.80%), Postives = 116/125 (92.80%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKGDDLF  H+LSLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHFSVDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  267 RKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.548e-56
Identity = 101/125 (80.80%), Postives = 115/125 (92.00%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKG+DLFV HTLSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  267 RKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.105e-54
Identity = 99/125 (79.20%), Postives = 114/125 (91.20%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKG+DLF  HTLSLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHF+V+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  267 RKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.591e-54
Identity = 97/125 (77.60%), Postives = 114/125 (91.20%), Query Frame = -2
Query:  323 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 697
            RKG+DLFV HT+SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  268 RKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = -2
Query:  326 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 697
            R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  253 RRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = -2
Query:  326 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 697
            R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  252 RRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = -2
Query:  326 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 697
            R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  253 RRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN192324 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = -2
Query:  326 RKGDDLFVXHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 697
            R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  253 RRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of CN192324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
DNJH_CUCSA1.362e-6188.80DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH1_ALLPO2.839e-5986.40DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH2_ALLPO3.708e-5984.80DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH8.548e-5680.80Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU2.105e-5479.20DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH3.591e-5477.60Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT3.873e-2445.24DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB3.873e-2445.24DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE3.873e-2445.24DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN3.873e-2445.24DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006L09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006L09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192324 ID=CN192324; Name=CN192324; organism=Citrus sinensis; type=EST; length=698bp
GAGGATTAACACCACCCTGAAATATTGTAAACACTAAAAATATTAATTAT
GAGCATTGAGTCTGAAGGTGCAAACGCTAGAATTCCATTACATAGTCAGT
TATCAGAAAAACATAAGAATAAAGACAGACAAACCAAAACTAGAACCTCT
AAAGCCTATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACA
ATGAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTG
AGCACACTGCACTCTCTGGGCACCACCTTGCATATCGTCATCTTCATCGT
ATGCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTC
ACATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAG
CTGGACTGAGGTCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGT
CTGGGCTCAGTGACTCAGGGAAGTCAACACTGAAATGAATGTACAGTTTG
CCCCTCATAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGC
CTTGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGA
GTTGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCT
TCTGTCAGTGACAGGGTGTGCTNCACAAATAGGTCATCACCCTTTCGC
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