CN192323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192323 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 3.661e-98 Identity = 176/256 (68.75%), Postives = 194/256 (75.78%), Query Frame = 3 Query: 9 SPRKTLPFFATGTPKRQITVKSLQKRSKNL-SPLRVXXXXXXXXXXXEETVRKDEKEDYGSLVDDEYG--KESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV 767 S K +PF + T K + V RSK +PLRV E R +++EYG KE S+F WRDHWYPVSLVEDLDPN+PT FQLLGRDLVLWFD N KW AFDD CPHRLAPLSEGR+DENGHLQCSYHGWSF GCGSCTRIPQAA+ GPEARA++SPRACA +FPTMVSQGLLFVWPDE G +RAN+ +PP LPD FDKPEFS+VTIQRDLFYGYDTLMENVSDPSHIDFAHHKV Sbjct: 16 SQSKKIPFLSP-TTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDSTEEKR----------IEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV 260
BLAST of CN192323 vs. ExPASy Swiss-Prot
Match: CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina GN=CAO PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.347e-20 Identity = 61/180 (33.89%), Postives = 81/180 (45.00%), Query Frame = 3 Query: 240 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRAC----ATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFS---SVTIQRDLFYGYDTLMENVSDPSHIDFAH 758 R+ WYP + L+P + F L G VL+ D +S D C HR PLS G++ NGH+QC YHGW FDG G+CT++P S R C P + G ++VWP + PP LP F P I D+ + LMEN+ D +H F H Sbjct: 131 RNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAP-TCIKDSCAHRACPLSLGKVI-NGHVQCPYHGWEFDGSGACTKMP-------------STRMCHGVGVAALPCVEKDGFVWVWPGD--------GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTH 287
BLAST of CN192323 vs. ExPASy Swiss-Prot
Match: CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii GN=CAO PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.287e-14 Identity = 56/187 (29.95%), Postives = 80/187 (42.78%), Query Frame = 3 Query: 207 GKESS-DSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPE--FSSVTIQRDLFYGYDTLMENVSDPSHIDFAH 758 G ESS + + R+ WYP L + F+L G V++ D D+C HR PLS G++ E G + C YHGW F+G G+CT++P P R + P G ++VWP + LPD PE I D+ + L+EN+ D +H F H Sbjct: 290 GLESSMEIEEGLRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQP-SCIRDECAHRGCPLSLGKVVE-GQVMCPYHGWEFNGDGACTKMPST----PFCRNVG-----VAALPCAEKDGFIWVWP-------GDGLPAETLPDFAQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTH 458
BLAST of CN192323 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.525e-11 Identity = 49/189 (25.93%), Postives = 78/189 (41.27%), Query Frame = 3 Query: 234 SWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDK----------CPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLF----YGYDTLMENVSDPSHIDFAH 758 S ++ WYPV+ DL D ++ D +WV F K C HR PL G ++E G +QC YHGW + G C ++P R++ P +G++++WP G + +T P +LP S TI ++ + L++N+ D +H F H Sbjct: 215 SLKNFWYPVAFSSDLKD-----------DTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSL----------PCFEQEGMVWIWP---GNDPPKSTIPSLLPP-------SGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTH 371 The following BLAST results are available for this feature:
BLAST of CN192323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192323 ID=CN192323; Name=CN192323; organism=Citrus sinensis; type=EST; length=769bpback to top |