CX302208

Overview
NameCX302208
Unique NameCX302208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: UCPB_DICDI (Mitochondrial substrate carrier family protein ucpB OS=Dictyostelium discoideum GN=ucpB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNE-LAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAK----VYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPIFGVE 393
            KG ++G+     RA +L  +++  YD IK +I   G+++ + L V            + T SP D+V+TR+MNQP D+     +YK   DC  K    +G  GLY GF+P W R  P T +  +++E ++ + G++
Sbjct:  157 KGLWKGVGPTTQRAALLTASQIPSYDHIKHMILDHGIIQVDGLQVHIVSSIFAGLIASITTSPVDLVKTRIMNQPFDSNGVGLIYKSSYDCFKKTFQSEGISGLYKGFLPNWFRIGPHTIVTFILYEYLRKVSGIK 292          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: S2534_DANRE (Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 43/129 (33.33%), Postives = 71/129 (55.04%), Query Frame = 1
Query:    4 GFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTV-SPFDMVRTRLMNQPAD----AKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 375
            G +RG+   V R MV + T++A +   K  I  +       ++             + + +PFD++ TRL NQP D     ++Y GFVDC+LK+ A +G LGLY G  P++ R AP TTL +++++ ++
Sbjct:  183 GLWRGVNGAVPRVMVGSATQLATFSSAKDWITHTQWFSPLSSLNTLCAAVMSGVAVSIIMTPFDVISTRLYNQPVDQFKQGRLYCGFVDCLLKVCAAEGVLGLYKGMTPVFVRLAPHTTLSMLLWDVLR 311          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: S2534_BOVIN (Solute carrier family 25 member 34 OS=Bos taurus GN=SLC25A34 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 1
Query:    4 GFYRGLEANVMRAMVLNGTKMACYDQIKGIIKG-SGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADA----KVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPIFG 387
            G +RG+   V R MV +  ++A +   K  ++    L ++   V           +   ++PFD+V TRL NQP D     K+Y G  DC++KI  ++GPL LY G  P++ R  P T L ++ +++++ + G
Sbjct:  165 GLWRGVGGAVPRVMVGSAAQLATFASAKAWVQERQWLPEDSWLVALAGGMISSIAVVAVMTPFDVVSTRLYNQPVDGAGRGKLYGGLTDCLVKIWRQEGPLALYKGLGPVYLRLGPHTILSMLFWDELRKLAG 297          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: OAC1_YEAST (Mitochondrial oxaloacetate transport protein OS=Saccharomyces cerevisiae GN=OAC1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQ-IKPIFGVE 393
            KG +RG++A ++R    +  ++  Y+  K I+  + L+K+  A+           +A  ++P+D++ TR+ NQ  D  +YKG +DC++K +  +G   LY GF     R AP T + L   EQ +K ++ +E
Sbjct:  188 KGLFRGIDAAILRTGAGSSVQLPIYNTAKNILVKNDLMKDGPALHLTASTISGLGVAVVMNPWDVILTRIYNQKGD--LYKGPIDCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFMEQTMKLVYSIE 317          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 37/124 (29.84%), Postives = 60/124 (48.39%), Query Frame = 1
Query:   10 YRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAK---VYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQI 372
            ++G   N++RAM +   +++ YDQ K ++  SG   +++              A   SP D+++TR+MN P        YKG  DC+ K +  +G    Y GF P + R  P T L  +  EQ+
Sbjct:  183 WKGCSPNLIRAMFMTAGQVSSYDQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQYKGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTILTFIFVEQL 306          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA--DAKV--YKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 381
            +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +A             A   +P D+VRTR+MNQ A  D +   YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  159 RGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVATHFLSSFTCGLVGALASNPVDVVRTRMMNQRALRDGRCAGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: UCP5_HUMAN (Brain mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A14 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPA---DAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 375
            +G +RG+     RA ++ G ++  YD  K  +  SG++ + +              A   +P D+VRTR+MNQ A      +YKG VD ILK+   +G   LY GF P W R  P   +  + +EQ+K
Sbjct:  194 RGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 321          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: S2534_HUMAN (Solute carrier family 25 member 34 OS=Homo sapiens GN=SLC25A34 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 40/133 (30.08%), Postives = 69/133 (51.88%), Query Frame = 1
Query:    4 GFYRGLEANVMRAMVLNGTKMACYDQIKGII-KGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADA----KVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPIFG 387
            G ++G+   V R MV +  ++A +   K  + K   L ++   V           +   ++PFD+V TRL NQP D     ++Y G  DC++KI  ++GPL LY G  P + R  P T L ++ +++++ + G
Sbjct:  165 GLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVVVMTPFDVVSTRLYNQPVDTAGRGQLYGGLTDCMVKIWRQEGPLALYKGLGPAYLRLGPHTILSMLFWDELRKLAG 297          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 37/125 (29.60%), Postives = 61/125 (48.80%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAKVYKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIK 375
            +G ++G+  N+ R  ++N  +M  YD IK  +    L+ + L                  SP D+V+TR MN P     Y+  +DC+LK++ ++GP   Y GF P + R      +  V +EQ+K
Sbjct:  172 RGLWKGILPNITRNAIVNCAEMVTYDVIKEKVLDYHLLTDNLPCHFVSAFGAGFCATVVASPVDVVKTRYMNSPPGQ--YQNPLDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVSYEQLK 294          
BLAST of CX302208 vs. ExPASy Swiss-Prot
Match: KMCP1_XENTR (Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 40/131 (30.53%), Postives = 65/131 (49.62%), Query Frame = 1
Query:    1 KGFYRGLEANVMRAMVLNGTKMACYDQIKGIIKGSGLVKNELAVQXXXXXXXXXXMATTVSPFDMVRTRLMNQPADAKV----YKGFVDCILKIIAKDGPLGLYAGFIPIWARFAPTTTLQLVIFEQIKPI 381
            +G ++G+     RA ++ G ++  YD  K  +  SGL+ + +              A   +P D+VRTR+MNQ +   V    YKG +DC+L+    +G   LY GF P W R  P   +  + +EQ+K +
Sbjct:  159 RGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILSGLMGDTVYTHFLASFTCGLAGALASNPVDVVRTRMMNQRSIRNVSNSSYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFITYEQLKKL 289          
The following BLAST results are available for this feature:
BLAST of CX302208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
UCPB_DICDI4.431e-1732.35Mitochondrial substrate carrier family protein ucp... [more]
S2534_DANRE1.207e-1433.33Solute carrier family 25 member 34 OS=Danio rerio ... [more]
S2534_BOVIN2.276e-1330.83Solute carrier family 25 member 34 OS=Bos taurus G... [more]
OAC1_YEAST1.129e-1230.30Mitochondrial oxaloacetate transport protein OS=Sa... [more]
M2OM_DICDI1.129e-1229.84Probable mitochondrial 2-oxoglutarate/malate carri... [more]
KMCP1_MOUSE1.475e-1232.06Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
UCP5_HUMAN2.516e-1232.81Brain mitochondrial carrier protein 1 OS=Homo sapi... [more]
S2534_HUMAN2.516e-1230.08Solute carrier family 25 member 34 OS=Homo sapiens... [more]
UCP3_PIG3.286e-1229.60Mitochondrial uncoupling protein 3 OS=Sus scrofa G... [more]
KMCP1_XENTR3.286e-1230.53Kidney mitochondrial carrier protein 1 OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionC08018C09SK PhyRootSw1 Citrus sinensis cDNA clone C08018C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302208 ID=CX302208; Name=CX302208; organism=Citrus sinensis; type=EST; length=686bp
AAAGGATTTTACCGAGGTTTGGAAGCTAACGTCATGAGAGCAATGGTTCT
TAACGGTACTAAGATGGCTTGTTACGATCAGATCAAGGGTATCATCAAGG
GTAGTGGACTTGTCAAGAATGAGCTCGCAGTTCAATTCTTCTCAGCCTTT
GGTGCTGGTTTCTTCATGGCCACCACAGTTTCTCCATTTGACATGGTCCG
AACAAGACTCATGAATCAACCAGCTGATGCTAAAGTCTACAAGGGCTTCG
TTGATTGCATACTTAAGATTATCGCAAAGGATGGACCTTTGGGATTATAC
GCTGGTTTCATTCCAATCTGGGCAAGATTTGCACCAACAACAACATTACA
ACTAGTTATTTTCGAGCAAATCAAGCCAATCTTCGGTGTCGAAGGAAATG
GTGAATAAACATTTTACAATCGAATTACCACAGATAATGAGAATATTCGA
CGAGCTCATTTACCCTACTCACCTCAAATATTTTCCAATTTTGTTAATTC
CCTTTAGTTTTGTACTTCCCAATACCTCTACATCCCTCGCCCAACAAATA
GATAGTTTAGATAAGTTCTACGCCTTTCCTCCCTCTCTCCTCTTTCCATA
CCCACTCAAAGAAAGTACAGAGATAGTGAGTTGTTAGCTTCGCATTCTTC
TTTATATTTGTTCAAGTTCTATAGATGTTGGTCTTG
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