CN192284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 8.003e-63 Identity = 120/164 (73.17%), Postives = 135/164 (82.32%), Query Frame = 1 Query: 10 MAAHPAYAETMSFGG-SNHGQGQVAVPFETHQGSLKVLLLHGNLDVWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 MA HPAY ETMS GG S+HG GQ VPF T GSL+V LLHGNLD+WVKEAK+LPNMD FH ++G + L K K+E S KITSDPYVTVSI GAVIGRTFVISNSE+PVWMQHF+VPVAHSAAEVHFVVKD+D +GSQIMGAVGIP E+LCSG++IEG Sbjct: 1 MAYHPAYTETMSMGGGSSHGGGQQYVPFATSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNRLGGMLSGLGRK---KVEGEKSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDSDIIGSQIMGAVGIPTEQLCSGNRIEG 161
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 2.757e-55 Identity = 110/169 (65.09%), Postives = 131/169 (77.51%), Query Frame = 1 Query: 10 MAAHPAYAETMSFGGSNHGQ-----GQVAVPFETHQGSLKVLLLHGNLDVWVKEAKNLPNMDMFHKK-IGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 MA HP Y ETMS GG + + + VPF+T GSL+V LLHGNLD+WVKEAK+LPNMD FH +G +F L + K++ S KITSDPYVTVSI GAVIGRTFVISNSE+PVWMQHF+VPVAHSAA+VHFVVKD+D +GSQI+GAV IP E+LCSG++IEG Sbjct: 1 MAYHPVYNETMSMGGGSSNEFGQWLDKQLVPFDTSSGSLRVELLHGNLDIWVKEAKHLPNMDGFHNTLVGGMFFGLGRR-NHKVDGENSSKITSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAKVHFVVKDSDIIGSQIIGAVEIPTEQLCSGNRIEG 168
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 7.770e-50 Identity = 102/156 (65.38%), Postives = 120/156 (76.92%), Query Frame = 1 Query: 49 GGSNHGQGQ----VAVPFETHQGSLKVLLLHGNLDVWVKEAKNLPNMDMFHKKI--GDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 GGSNH GQ VP T GSL V LLHGNLD+WVKEAK+LPNM + K+ G F +L ++ K++ S K TSDPYVTVSI GAVIGRTFVISNSE+PVWMQHF+VPVAHSAAEVHFVVKDND +GS+I+G VGIP ++LCSG++IEG Sbjct: 5 GGSNHEFGQWLDQQLVPLATSSGSLMVELLHGNLDIWVKEAKHLPNMICYRNKLVGGISFSELGRRIR-KVDGEKSSKFTSDPYVTVSISGAVIGRTFVISNSENPVWMQHFDVPVAHSAAEVHFVVKDNDPIGSKIIGVVGIPTKQLCSGNRIEG 159
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3) HSP 1 Score: 196.052 bits (497), Expect = 7.770e-50 Identity = 95/133 (71.43%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 100 QGSLKVLLLHGNLDVWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 +GSLKVLL HGNLD+W+ AKNLPNMDMFHK +GD+FG+L KIE L+ KITSDPYV+VS+ GAVIGRT+V+SNSE+PVWMQHF VPVAH AAEVHFVVKD+D VGSQ++G V IPVE++ SG KIEG Sbjct: 146 KGSLKVLLSHGNLDIWIYHAKNLPNMDMFHKTLGDMFGRL----PGKIEGQLTSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEG 274
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 4.263e-48 Identity = 97/148 (65.54%), Postives = 115/148 (77.70%), Query Frame = 1 Query: 55 SNHGQGQVAVPFETHQGSLKVLLLHGNLDVWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 S H G VPF + SLKVLLLHGNLD+WV A NLPN+D+FHK +G VFG + T+ IE LS KITSDPYV++S+ GAVIGRT+VISNSE+PVW QHF VPVAH AAEVHFVVKD+D VGSQ++G V IPVE++ SG +IEG Sbjct: 94 SPHSPGMHIVPFG--KASLKVLLLHGNLDIWVSCANNLPNLDLFHKTLGVVFGGM----TNMIEGQLSKKITSDPYVSISVAGAVIGRTYVISNSENPVWQQHFYVPVAHHAAEVHFVVKDSDAVGSQLIGIVTIPVEQIYSGARIEG 235
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.783e-23 Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 115 VLLLHGNLDVWVKEAKNLPNMDMFHKKIGDVFGKLNV--------KVTSKIESHLSDK--------ITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEG 498 V+LLHG+LD+ + +A+ LPNMDMF + + +F N V + + DK ITSDPYVTV + A + RT V+ NS+ P+W + FN+ +AH A + F VKD+D G+QI+G IPV + SG++I G Sbjct: 9 VMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASGERISG 152
BLAST of CN192284 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.168e-11 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 118 LLLHGNLDVWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKI-----TSDPYVTVSICGAVIGRTFVISNS-ESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIE 495 +LLHG L V + E NL K+ G F SKI+ H+ + I T Y TV + A +GRT I N +P W + F++ AH A+ V F VKD++ +G+ ++G +PVE+L G++I+ Sbjct: 4 ILLHGTLHVTIYEVDNL------QKEGGGHF-------FSKIKEHVEETIGFGKGTPAIYATVDLEKARVGRTRKIKNEPNNPRWYESFHIYCAHMASNVIFTVKDDNPIGATLIGRAYVPVEELLEGEEID 122 The following BLAST results are available for this feature:
BLAST of CN192284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192284 ID=CN192284; Name=CN192284; organism=Citrus sinensis; type=EST; length=500bpback to top |