CN192247

Overview
NameCN192247
Unique NameCN192247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig160 contig Csv1_Contig160:405..1016. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.076e-49
Identity = 93/186 (50.00%), Postives = 131/186 (70.43%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LY+A+Y+   GE ILDEAI+FTT HL   VA   +   L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T+A++RW+I+ +D
Sbjct:  154 LLELYQASYLRVHGEDILDEAISFTTNHLSLAVAS--LDYPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTKAIERWDIKCID 335          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.712e-49
Identity = 94/187 (50.27%), Postives = 131/187 (70.05%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LY+A+Y+   GE ILDEAI+FT+ HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+            ++WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+ +D
Sbjct:  154 LLELYQASYLRVHGEDILDEAISFTSNHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKVLLEFAKIDFNMVQLLHRKELSEISRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCID 335          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.712e-49
Identity = 95/187 (50.80%), Postives = 130/187 (69.52%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LY+A+Y+   GE ILDEAI+FTT HL   VA  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+ +D
Sbjct:  154 LLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCID 335          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.542e-49
Identity = 94/187 (50.27%), Postives = 130/187 (69.52%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQ-DHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LY+A+Y+   GE ILDEAI+FTT HL   V+  DH    L+E+++HAL + +R+ LPR+EAR+++S+      H  NK LL FAK+DFN+             +WWKDLDF  KLPYARDR+VE YFW  G YFEPQY+ GRK++T++  + SI+DDTYD+Y T EEL  +T A++RW+I+ +D
Sbjct:  154 LLELYQASYLRVHGEDILDEAISFTTNHLSLAVSSLDH---PLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESH--NKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCID 335          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.114e-48
Identity = 93/186 (50.00%), Postives = 128/186 (68.82%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LYEA+YM   GE ILDEAI+FTT  L   +   H    L+EQ+ HAL + +R+ LPR+EAR F+S+      H  NK+LL FAK+DFN+             +WWKDLDFT KLP+ARDR+VE YFW +G YFEPQY+ GRK++T++  + SI+DDTYD+Y T +EL  +T A++RW+I+ ++
Sbjct:  155 LLELYEASYMRVHGEDILDEAISFTTAQLTLALPTLH--HPLSEQVGHALKQSIRRGLPRVEARNFISIYQDLESH--NKSLLQFAKIDFNLLQLLHRKELSEICRWWKDLDFTRKLPFARDRVVEGYFWIMGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYDELIPYTNAIERWDIKCMN 336          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 1.260e-46
Identity = 89/186 (47.85%), Postives = 127/186 (68.28%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L+LYEA+++    + IL++A+AF+T HL+S  A  H+   L EQ+ HAL + L K +PR+E R+F+S I    +   N  LL FAKLDFN+            ++WWKDLDF T LPYARDR+VE YFW LG YFEPQY+  R ++ +   ++SI+DDT+DAYGT++EL  +T+A+QRW+I  +D
Sbjct:  147 LLNLYEASHVRTHADDILEDALAFSTIHLES--AAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYD-KEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWALGVYFEPQYSQARVMLVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEID 329          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.973e-41
Identity = 86/187 (45.99%), Postives = 111/187 (59.36%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPK-LAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LYEAAYM   GE ILD+A+ FT T L  +     ++   ++ QI  AL +PL K LPRLEA  ++      + H  ++TLL  AKL FN             +KWWK  D    LPYAR+R VE YFW L  YFEPQY+  R  +++   I + +DDTYDAYGT EEL  FTEA+QRW+I  +D
Sbjct:  143 LLELYEAAYMFVPGEGILDDALVFTRTCLDEIAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYIPFYQQQASH--SETLLKLAKLGFNQLQSLHKKELSIISKWWKSFDVANNLPYARNRPVECYFWALAVYFEPQYSESRVFLSRFFSIQTFLDDTYDAYGTYEELEQFTEAIQRWSITCLD 327          

HSP 2 Score: 25.7942 bits (55), Expect = 3.973e-41
Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 2
Query:    2 DDEGRFKSSLINDVH 46
            D EGRFK SL  DVH
Sbjct:  127 DKEGRFKESLEKDVH 141          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.925e-40
Identity = 80/186 (43.01%), Postives = 119/186 (63.98%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            MLSL+EA++++  GE IL+EA AFT  +L+S   +  + P L   I +AL +P    +PRLEAR F+ +  +  +   N+TLL FAKLD+N             +KWWKDL+  + +PYARDR+ E++FW +  YFEP YA  R I+ ++  ++S+IDDT DAY T+EE H+  EAV RW++  ++
Sbjct:  201 MLSLFEASHLSVHGEDILEEAFAFTKDYLQSSAVE--LFPNLKRHITNALEQPFHSGVPRLEARKFIDLYEADIE-CRNETLLEFAKLDYNRVQLLHQQELCQFSKWWKDLNLASDIPYARDRMAEIFFWAVAMYFEPDYAHTRMIIAKVVLLISLIDDTIDAYATMEETHILAEAVARWDMSCLE 383          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.544e-39
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQDHVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            MLSLYEA++    GE+IL+EA  F+T HL+  V Q+     LA  +NH+L  PL   +PRLEAR+F+++     D   N  LL FA+LDFNI            + WWK       L +ARDR VE +FW +G  F+PQ+ + R++ T++  +++ IDD YD YGTL+EL LFT+ V+RW+I A+D
Sbjct:  193 MLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNK-EKNLATLVNHSLEFPLHWRMPRLEARWFINIYRHNQD--VNPILLEFAELDFNIVQAAHQADLKQVSTWWKSTGLVENLSFARDRPVENFFWTVGLIFQPQFGYCRRMFTKVFALITTIDDVYDVYGTLDELELFTDVVERWDINAMD 375          
BLAST of CN192247 vs. ExPASy Swiss-Prot
Match: AMS1_ARTAN (Amorpha-4,11-diene synthase OS=Artemisia annua GN=AMS1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.649e-38
Identity = 84/188 (44.68%), Postives = 112/188 (59.57%), Query Frame = 3
Query:   51 MLSLYEAAYMAARGEHILDEAIAFTTTHLKSLVAQD--HVTPKLAEQINHALYRPLRKTLPRLEARYFMSMINSTSDHLYNKTLLNFAKLDFNIXXXXXXXXXXXXTKWWKDLDFTTKLPYARDRLVELYFWDLGTYFEPQYAFGRKIMTQLNYILSIIDDTYDAYGTLEELHLFTEAVQRWNIEAVD 608
            +L LYEA  M   GE IL++A+ FT + L S++ +D     P L  +I  AL +PL K LPR+EA  ++        H  NKTLL  AKL+FN+             KWWK  D     P  RDR+VE YFW LG+ +EPQY+  R   T+   ++++IDDTYDAYGT EEL +FTEAV+RW+I  +D
Sbjct:  143 LLELYEATSMRVPGEIILEDALGFTRSRL-SIMTKDAFSTNPALFTEIQRALKQPLWKRLPRIEAAQYIPFYQQQDSH--NKTLLKLAKLEFNLLQSLHKEELSHVCKWWKAFDIKKNAPCLRDRIVECYFWGLGSGYEPQYSRARVFFTKAVAVITLIDDTYDAYGTYEELKIFTEAVERWSITCLD 327          
The following BLAST results are available for this feature:
BLAST of CN192247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
DCS2_GOSAR2.076e-4950.00(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI2.712e-4950.27(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS1_GOSAR2.712e-4950.80(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS4_GOSAR3.542e-4950.27(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS3_GOSAR5.114e-4850.00(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
5EAS_TOBAC1.260e-4647.85Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
ECS1_ARTAN3.973e-4145.99Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
CASS_RICCO3.925e-4043.01Casbene synthase, chloroplastic OS=Ricinus communi... [more]
MYRS_QUEIL2.544e-3944.09Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
AMS1_ARTAN1.649e-3844.68Amorpha-4,11-diene synthase OS=Artemisia annua GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006J10_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192247 ID=CN192247; Name=CN192247; organism=Citrus sinensis; type=EST; length=612bp
AGATGATGAGGGTAGATTCAAGTCATCGTTGATAAACGATGTTCACTGTG
ATGTTAAGTTTGTACGAGGCAGCATACATGGCAGCCCGCGGAGAACATAT
ATTAGATGAAGCCATTGCTTTCACTACCACTCACCTGAAGTCATTGGTAG
CTCAGGATCATGTAACCCCTAAGCTTGCGGAACAGATAAATCATGCTTTA
TACCGTCCTCTTCGTAAAACCCTACCAAGATTAGAGGCGAGGTATTTTAT
GTCCATGATCAATTCAACAAGTGATCATTTATACAATAAAACTCTGCTGA
ATTTTGCAAAGTTAGATTTTAACATATTGCTAGAGCTGCACAAGGAGGAA
CTCAATGAATTAACAAAGTGGTGGAAAGATTTAGACTTCACTACAAAACT
ACCTTATGCAAGAGACAGATTAGTGGAGTTATATTTTTGGGATTTAGGGA
CATACTTCGAGCCTCAATATGCATTTGGGAGAAAGATAATGACCCAATTA
AATTACATATTATCCATCATAGATGATACTTATGATGCGTATGGTACACT
TGAAGAACTCCACCTCTTTACTGAAGCAGTTCAAAGATGGAATATTGAGG
CCGTAGATATGC
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