CX302177

Overview
NameCX302177
Unique NameCX302177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.193e-66
Identity = 133/227 (58.59%), Postives = 169/227 (74.45%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCM 689
            IR G  DIG+A GVE M+     S    P  I+  + ENE+AR+CL+ MG TSENVAE++ ISR+ QD FA  SQ++A  AQ+KG F+ EIVP+ T++   KGD   R+ I V +D+G+R  TT E L KLKPAFK  G +TAGNSSQ++DGAAAVLLARRS AE+LGLPI+    ++AV GVPP+IMG+GPA+AIP AL++AGL   DIDI+E+NEAFASQALYC+
Sbjct:  137 IRNGSYDIGMACGVESMTL----SERGNPGNISSRLLENEKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGD---RKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCV 356          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.220e-65
Identity = 132/227 (58.15%), Postives = 170/227 (74.89%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCM 689
            IR G  DIG+A GVE MS     S+   P  I+  + E+++AR+CL+ MG TSENVAE++ ISR+ QD FA  SQ++A  AQ+KG F+ EIVP+ T++   KGD   R+ I V +D+G+R  TT E L KLKPAFK  G +TAGNSSQ++DGAAAVLLARRS AE+LGLPI+    ++AV GVPP+IMG+GPA+AIP AL++AGL   DIDI+E+NEAFASQALYC+
Sbjct:  137 IRNGSYDIGMACGVESMSL----SNRGNPGNISSRLLESDKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGD---RKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCV 356          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 3.550e-65
Identity = 132/232 (56.90%), Postives = 169/232 (72.84%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCMNVFEL 704
            IR G  DIG+A GVE MS  D  +    P  I   + E E+AR+CL+ MG TSENVAE++ ISRE QD FA  SQ++A  AQ+KG F+ EIVP+ T++   KG    +  I V +D+GIR  TT E L KLKPAFKK+G +TAGNSSQ++DGAAA+LLARRS AE+LGLPI+    ++AV GVPP+IMG+GPA+AIP AL++AGL  +D+DI+E+NEAFASQA YC+    L
Sbjct:  137 IRNGSYDIGMACGVESMSLADRGN----PGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGT---KRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRL 361          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.301e-64
Identity = 128/227 (56.39%), Postives = 169/227 (74.45%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCM 689
            IR G  DIG+A GVE MS   M +    P  I+  + E+E+AR+CL  MG TSENVAE++ ISR+ QD FA  SQ++A  AQ++G F+ EIVP+ T++   KGD   ++ I V +D+G+R  TT + L KLKPAFK  G +TAGNSSQ++DGAAAVLLARRS AE+LGLPI+    ++AV GVPP++MG+GPA+AIP AL++AGL   DIDI+E+NEAFASQA+YC+
Sbjct:  137 IRNGSYDIGMACGVESMSLSGMGN----PGNISSRLLESEKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDKGD---KKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCV 356          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.322e-63
Identity = 126/227 (55.51%), Postives = 167/227 (73.57%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCM 689
            IR G  DIG+A GVE M+     S       I+  + ENE+AR+CL+ MG TSENVAE++ +SR+ QD FA  SQ++A  AQ++G F  EIVP+ T++   KGD   ++ I V +D+G+R  TT + L KLKPAFK  G +TAGNSSQ++DGAAAVLLARRS AE+LGLPI+    ++AV GVPP++MG+GPA+AIP AL++AGL   DIDI+E+NEAFASQA+YC+
Sbjct:  137 IRNGSYDIGMACGVESMTL----SQRGNHGNISSRLLENEKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDKGD---KKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCV 356          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.659e-60
Identity = 124/235 (52.77%), Postives = 161/235 (68.51%), Query Frame = 3
Query:    6 QIRAGILDIGIAGGVEQMS-QYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCMNVFELD 707
            +IRAG +DIGI  GVE MS QY   S  P     + +   NE+A+ CL+ MG TSENVA KYN+SR+ QD FAA+S  +A  AQ  G F  EI+PIKT++     D++  +E+ V+KDDGIR   T E L KLKPAF   G + AGN+SQI+DGA AVLL RRS AEKLG PI+A+++     GVPPE+MG+GPA+AIP  L+  GL   D+D++E+NEAFASQAL+ +    +D
Sbjct:  128 KIRAGQIDIGIGCGVESMSNQYGPNSVTP----FSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIKTTVLD---DDDNEKEVTVNKDDGIRPGVTAEKLGKLKPAFSAEGTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGID 355          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.724e-57
Identity = 121/234 (51.71%), Postives = 156/234 (66.67%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTS-IKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCMNVFELD 707
            I+AG  DIGI  G+E M+   M         +   V +  QA+NCL+ MG TSENVA+++ +SR+ QD+ A +S R+A  A   G FKDEI+P+KT  +  K GDE+    I V  DDGIR  TT  SL KLKP FKK+G +TAGNSSQ++DGA AVLL +RS A + GLP++  + T A  GV P IMG+GPA AIP A+K AGL+  DID++E+NEAFASQ +YC N   LD
Sbjct:  152 IKAGFYDIGIGAGLESMTTNPMAWEGS----VNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEK---PITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLD 378          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 3.558e-57
Identity = 122/234 (52.14%), Postives = 154/234 (65.81%), Query Frame = 3
Query:    9 IRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSI-KKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCMNVFELD 707
            I+AG  DIGI  G+E M+     +       +   V + EQA NCL+ MG TSENVA ++N+SRE QD+ A +S R+A  A   G FKDEI P+KT I   K GDE+    I V  DDGIR  TT   L KLKP FK++G +TAGNSSQ++DGA AVLL RR+ A + GLPI+  + T +  GV P IMGVGPA AIP A+K AGL+  D+D++E+NEAFASQ +YC N   LD
Sbjct:  144 IKAGFYDIGIGAGLESMTT----NPRGWKGSVNPNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQDQAAVDSHRKAASATASGKFKDEITPVKTKIVDPKTGDEK---PITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLD 370          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.934e-56
Identity = 115/235 (48.94%), Postives = 161/235 (68.51%), Query Frame = 3
Query:    6 QIRAGILDIGIAGGVEQMSQYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAF-KKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALYCMNVFELD 707
            +I+ G +DIG+A GVE M+  + ++  P   + +EE+ +N +A+ CL+ MG T+ENVA  + ISR+ QD FAA S ++AY+A+ +GLF+DEI+PIK           + +      D+G R   T ESL  ++PAF K  G +TAGN+SQ++DG A VLLARRS A +L LP++ R+I     GVPPEIMGVGPA+AIPK L+  GLQ  DIDI+E+NEAFA+QALYC++   +D
Sbjct:  138 KIKVGQIDIGLALGVESMTN-NYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIK-----------LPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGID 360          
BLAST of CX302177 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.952e-55
Identity = 118/227 (51.98%), Postives = 158/227 (69.60%), Query Frame = 3
Query:    6 QIRAGILDIGIAGGVEQMS-QYDMQSSAPQPDLIAEEVFENEQARNCLMGMGQTSENVAEKYNISREVQDRFAAESQRRAYEAQTKGLFKDEIVPIKTSIKKKKGDEEIREEIFVDKDDGIRKETTFESLQKLKPAFKKNGVSTAGNSSQITDGAAAVLLARRSTAEKLGLPIIARWITHAVAGVPPEIMGVGPAFAIPKALKQAGLQTTDIDIYELNEAFASQALY 683
            +I+ G ++ G+AGG E MS  Y     AP+ D     + ++ Q   CL+ MG T+ENVA ++NISRE QD FAA+S  +A +A   G FK EI+PI++ I+   G E+   EI VD D+G R+  T ESL KL+PAF  +G +TAGN+SQ++DGAAAVLL +RS AE  G PII +++  + AGVPPEIMGVGPAFAIP+ LK+ GL   DID++E+NEAFA+Q LY
Sbjct:  125 KIKTGEIECGLAGGAESMSTNYRDPRVAPRID---PHLADDAQMEKCLIPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVASGAFKSEILPIRSIIRNSDGTEK---EIIVDTDEGPREGVTAESLGKLRPAF--DGTTTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVLKRTGLTVDDIDVFEINEAFAAQCLY 343          
The following BLAST results are available for this feature:
BLAST of CX302177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIKB_RAT4.193e-6658.593-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT1.220e-6558.153-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIK_HUMAN3.550e-6556.903-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKA_MOUSE2.301e-6456.393-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THIKB_MOUSE3.322e-6355.513-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIK_YARLI7.659e-6052.773-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIK2_ARATH2.724e-5751.713-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
THIK1_ARATH3.558e-5752.143-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIK_YEAST3.934e-5648.943-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
THIKB_CANTR1.952e-5551.983-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionC08018A01SK PhyRootSw1 Citrus sinensis cDNA clone C08018A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX302177 ID=CX302177; Name=CX302177; organism=Citrus sinensis; type=EST; length=708bp
GCCTCCAGATTAGAGCTGGTATCCTCGATATCGGTATTGCCGGTGGTGTT
GAACAAATGTCCCAATATGACATGCAAAGCTCCGCTCCCCAACCCGATTT
GATCGCCGAAGAAGTATTTGAGAATGAACAAGCCAGAAACTGCCTTATGG
GTATGGGACAAACCTCTGAAAATGTTGCCGAAAAGTACAACATCAGCAGA
GAAGTCCAAGACAGATTCGCCGCTGAATCCCAAAGAAGAGCCTACGAAGC
TCAAACTAAGGGCCTCTTCAAGGACGAAATCGTCCCCATCAAGACCTCCA
TCAAGAAGAAGAAGGGTGACGAAGAAATCAGAGAAGAAATCTTTGTCGAC
AAGGATGACGGTATCAGAAAGGAAACCACTTTCGAGTCCCTCCAAAAGCT
CAAGCCCGCTTTCAAGAAGAACGGTGTCTCCACTGCCGGTAACTCCTCCC
AAATCACCGATGGTGCTGCTGCCGTCCTCTTGGCCAGAAGATCTACCGCT
GAAAAGCTCGGTCTTCCCATCATCGCCAGATGGATCACCCACGCCGTCGC
TGGTGTCCCCCCTGAGATCATGGGTGTCGGCCCCGCTTTCGCTATCCCCA
AGGCCCTCAAGCAAGCTGGTCTCCAAACCACCGATATCGATATCTATGAA
CTCAACGAAGCCTTCGCCAGTCAAGCTTTGTACTGCATGAACGTCTTTGA
GCTCGATG
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