CN192232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT1_MIMGU (Metallothionein-like protein 1 OS=Mimulus guttatus PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = -1 Query: 374 CGGS---SMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 559 CG + SMYPD+ + +TTV T++ GVAP+KM+SEGSE FGAEGG GCKCG N KCDPCNC Sbjct: 13 CGDNCSCSMYPDMET--NTTV---TMIEGVAPLKMYSEGSEKSFGAEGGNGCKCGSNCKCDPCNC 72
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2_ACTDE (Metallothionein-like protein type 2 OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.670e-15 Identity = 40/63 (63.49%), Postives = 44/63 (69.84%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 562 GCGG MYPDL E TT TETL++GVAP K + EGSEMG AE GCKCG + KCDPC C Sbjct: 19 GCGGCGMYPDLSYSEMTT--TETLIVGVAPQKTYFEGSEMGVAAEN--GCKCGSDCKCDPCTC 77
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2_CICAR (Metallothionein-like protein 2 OS=Cicer arietinum PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.411e-14 Identity = 38/63 (60.32%), Postives = 43/63 (68.25%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 562 GCGG MYPD+ E TT +ETLV+GVA K EG+EMGFGAE GCKCG N C+PC C Sbjct: 19 GCGGCKMYPDMSYTEQTT--SETLVMGVASGKTQFEGAEMGFGAEND-GCKCGSNCTCNPCTC 78
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2_MALDO (Metallothionein-like protein type 2 OS=Malus domestica GN=MT1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14 Identity = 38/63 (60.32%), Postives = 41/63 (65.08%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 562 GC G M PDL E +T TETLV+GVAP K H E SEMG AE GCKCG N C+PCNC Sbjct: 20 GCNGCGMAPDLSYMEGST--TETLVMGVAPQKSHMEASEMGVAAEN--GCKCGDNCTCNPCNC 78
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2_RICCO (Metallothionein-like protein type 2 OS=Ricinus communis GN=MTI PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.016e-14 Identity = 40/64 (62.50%), Postives = 42/64 (65.62%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGF-GAEGGCGCKCGPNSKCDPCNC 562 GCGG MYPD+ E TT TETLVLGV K H EG EMG GAE G GCKCG N C+PC C Sbjct: 19 GCGGCKMYPDMSFSEKTT--TETLVLGVGAEKAHFEGGEMGVVGAEEG-GCKCGDNCTCNPCTC 79
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT1_COFAR (Metallothionein-like protein 1 OS=Coffea arabica GN=METAL1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = -1 Query: 374 GGCGGSSMYPDLRSFESTTVATETLVLGVAPVKM-HSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 565 GGCGG MYP+L E+T A ETL+LGVAP K + EG+ AE G GCKCGP+ KC+PCNC Sbjct: 18 GGCGGCKMYPELSYTENT--AAETLILGVAPPKTTYLEGAGEEAAAENG-GCKCGPDCKCNPCNC 79
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2A_ORYSJ (Metallothionein-like protein 2A OS=Oryza sativa subsp. japonica GN=MT2A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGC--GCKCGPNSKCDPCNC 562 GCGG MYP++ E TT T+T+++GVAP K H+EG E G A G GCKCG N C+PCNC Sbjct: 19 GCGGCKMYPEMAE-EVTT--TQTVIMGVAPSKGHAEGLEAGAAAGAGAENGCKCGDNCTCNPCNC 80
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2B_SOLLC (Metallothionein-like protein type 2 B OS=Solanum lycopersicum GN=MTB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 34/63 (53.97%), Postives = 38/63 (60.32%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 562 GCGG MYPD+ ES+T TETLVLGV P K EMG GCKCG + KC+PC C Sbjct: 19 GCGGCKMYPDMSYTESSTT-TETLVLGVGPEKTSFGAMEMGESPVAENGCKCGSDCKCNPCTC 80
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT2_TRIRP (Metallothionein-like protein 2 OS=Trifolium repens GN=MT1A PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.120e-11 Identity = 37/63 (58.73%), Postives = 40/63 (63.49%), Query Frame = -1 Query: 374 GCGGSSMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGGCGCKCGPNSKCDPCNC 562 GCGG M DL ESTT TET+V+GV K EG+EMG AE G GCKCG N CDPC C Sbjct: 19 GCGGCKMNADLSYTESTT--TETIVMGVGSAKAQFEGAEMG--AESG-GCKCGANCTCDPCTC 76
BLAST of CN192232 vs. ExPASy Swiss-Prot
Match: MT4C_ORYSJ (Metallothionein-like protein 4C OS=Oryza sativa subsp. japonica GN=MT4C PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.463e-11 Identity = 37/68 (54.41%), Postives = 42/68 (61.76%), Query Frame = -1 Query: 374 GCGGS--SMYPDLRSFESTTVATETLVLGVAPVKMHSEGSEMGFGAEGG---CGCKCGPNSKCDPCNC 562 GCGG MYPDL +TT T T VLGVAP K HSEG +G AE G GC CG + +C+PCNC Sbjct: 13 GCGGGCGKMYPDLAEKITTTTTTATTVLGVAPEKGHSEG--VGKAAESGEAAHGCSCGSSCRCNPCNC 78 The following BLAST results are available for this feature:
BLAST of CN192232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192232 ID=CN192232; Name=CN192232; organism=Citrus sinensis; type=EST; length=565bpback to top |