CN192217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NC2A_RAT (Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.839e-24 Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 2 Query: 227 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK--AAGDECNDSDEESKRSRM 604 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + T D+ + RK ++G + + +SK ++ Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKPGSSGRKNGGTGSKSKDKKL 133
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NC2A_HUMAN (Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 9.128e-24 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 227 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK 550 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARRGRK 113
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NC2A_MOUSE (Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=2 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 2 Query: 227 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRK 550 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRK 113
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NC2A_BOVIN (Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 227 RKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD-YSHGHSDATSEDRSISKRRKA 553 +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L + ++T R AKTM++ HLK C++ FDFL+D+V+ VPD G + D+ + RK+ Sbjct: 5 KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGPRRGRKS 114
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NC2A_DICDI (Dr1-associated corepressor homolog OS=Dictyostelium discoideum GN=drap1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.936e-22 Identity = 53/123 (43.09%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 224 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDECNDSDEESK 592 M+KK T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL +T +IT + K +S HLK C++ + FDFL +IV R+PD ++ + +K G++ + +EE + Sbjct: 1 MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGKVISVNHLKECIKQESTFDFLTEIVDRIPD---------DKNEKRGRPKKTEGEDGGEEEEEEE 114
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: DPB3_SCHPO (DNA polymerase epsilon subunit C OS=Schizosaccharomyces pombe GN=dpb3 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.123e-20 Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 242 TRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPD 490 +RFP ARIKKIMQAD+DVGK+A PV++SKALELF+Q + + + T AK ++ HLKH VQS FDFL+DIV +VPD Sbjct: 22 SRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQAKRVTVSHLKHAVQSVEQFDFLQDIVEKVPD 104
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: DPB3_YARLI (DNA polymerase epsilon subunit C OS=Yarrowia lipolytica GN=DPB3 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.572e-18 Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 230 KKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDE 565 +++ TRFP ARIKK+MQ+D+D+GK+A A P V+KALELF+ L + T R +K +S HLK V FDFL+DIVS+ PD + AT E+ +R + E Sbjct: 6 REIKTRFPVARIKKLMQSDDDIGKVAQATPTAVAKALELFMISLIEETCNQARMRNSKRVSPSHLKQAVLETEQFDFLQDIVSKHPD---AVAPATGEEEQPKRRGRKPAQE 114
BLAST of CN192217 vs. ExPASy Swiss-Prot
Match: NCB1_YEAST (Negative cofactor 2 complex subunit alpha OS=Saccharomyces cerevisiae GN=BUR6 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 233 KLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSSLHLKHCVQSYNVFDFLRD 469 ++ T FP A++KKIMQ DED+GK++ A PV+ ++LE F+ L ++ E+ +G K +++ LK + + FDFLR+ Sbjct: 48 RIKTHFPPAKVKKIMQTDEDIGKVSQATPVIAGRSLEFFIALLVKKSGEMARGQGTKRITAEILKKTILNDEKFDFLRE 126 The following BLAST results are available for this feature:
BLAST of CN192217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN192217 ID=CN192217; Name=CN192217; organism=Citrus sinensis; type=EST; length=627bpback to top |