CN192193

Overview
NameCN192193
Unique NameCN192193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 298.13 bits (762), Expect = 3.027e-80
Identity = 154/188 (81.91%), Postives = 160/188 (85.11%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSA---AGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKKIED+I+QAIQWL+ NQLAEADEFEDKMKELESICNPIIAKMYQ                    A   AGPKIEEVD
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDDAPPASGGAGPKIEEVD 651          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.170e-78
Identity = 152/185 (82.16%), Postives = 157/185 (84.86%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFELS IPPAPR VPQITV FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKVEAKN+LENYAYNMRNTVKDEKIGSKL   DKKKIEDA+DQAI WL+SNQLAE DEFEDKMKELE ICNPIIAKMYQ                  GS+AGPKIEEVD
Sbjct:  466 KFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDDAPPSGGSSAGPKIEEVD 650          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 4.833e-78
Identity = 147/190 (77.37%), Postives = 159/190 (83.68%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGS-----AAGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDIDANGILNVSAEDKTTG+KNKITITNDKGRLSK++IEKMVQEAEKYK+EDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKK+ED+I++AIQWLD NQL EADEFEDKMKELES+CNPIIAKMYQ                   +      AGPKIEEVD
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGGAGPKIEEVD 653          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.313e-78
Identity = 150/185 (81.08%), Postives = 157/185 (84.86%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDIDANG LNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVEAKNALENYAYNMRNT+KDEKI SKL   D+ KIEDAI+QAIQWLD NQLAEA+EFEDKMKELES+CNPIIAKMYQ                  G  AGPKIEEVD
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ----GAGGDMDDEGPAPSGGGAGPKIEEVD 644          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.077e-77
Identity = 149/188 (79.26%), Postives = 160/188 (85.11%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ---XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIE+MVQEAEKYK+EDEE KKKVEAKNALENYAYNMRNT+KD+KI S+L  ADKK+IEDAID+AI+WLD+NQLAEADEFEDKMKELESICNPIIAKMYQ                      + AGPKIEEVD
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.077e-77
Identity = 148/186 (79.57%), Postives = 158/186 (84.95%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGS-AAGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYK+EDEEHKKKV+AKNALENYAYNMRNT++DEKIG KL   DKKKIED+I+ AI+WL++NQLAE DEFEDKMKELESICNPIIAKMYQ                   +  AGPKIEEVD
Sbjct:  464 KFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDEDVPPSAGGAGPKIEEVD 649          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 284.263 bits (726), Expect = 4.524e-76
Identity = 147/183 (80.33%), Postives = 154/183 (84.15%), Query Frame = -2
Query:  166 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEE 714
            KFELSGIPP PRGVPQI V FDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSK+EIEKMVQEAEKYK+EDEEHKKKVE+KNALENYAYNMRN VKDEKIG+KL  ADKKKIE+AID +IQWLD NQLAEADEF+DKMKELESICNPIIAKMYQ                  G  AGPKIEE
Sbjct:  464 KFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQ-GAGGDMGGGMEDEGPTSGGGAGPKIEE 645          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 3.830e-75
Identity = 147/186 (79.03%), Postives = 153/186 (82.26%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFELSGIPPAPRGVPQITV FDID N ILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKAEDEE KKKV+AKNALENYAYNMRNT+KD+KI SKL   DKKKIEDA+D AI WLDSNQLAE +EFEDKMKELE ICNPIIAKMY                    GS AGPKIEEVD
Sbjct:  460 KFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.176e-72
Identity = 136/185 (73.51%), Postives = 151/185 (81.62%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFEL+GIPPAPRGVPQ+ V FDIDANGILNVSAEDKT G KNKITITNDKGRLSK+EIEKMV++AE+YKAEDEE KKKVEAKN+LENYAYNMRNT+KDEKIG KL P +K+KIE A++ AIQWL+ NQ+AE DEFEDK KELE ICNPIIAKMYQ                   + AGPKIEEVD
Sbjct:  463 KFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ--GAAGPGGDVPMGADMPAAGAGPKIEEVD 645          
BLAST of CN192193 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.410e-69
Identity = 134/190 (70.53%), Postives = 149/190 (78.42%), Query Frame = -2
Query:  160 KFELSGIPPAPRGVPQITVAFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-----XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 714
            KFEL+GIPPAPRGVPQI V FDIDANGILNV AEDKT G KNKITITND GRLSKDEIEK+V+EAEKYKAEDEE KKKVEAKNALENYAYNMRNT+KD+KI  KLD  DK+KIE A+++AI+WL+ NQLAE DE EDK+KELE +CNPIIA++YQ                        S AGPKIEEVD
Sbjct:  466 KFELTGIPPAPRGVPQINVVFDIDANGILNVFAEDKTAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGRGDVPIGGPGDMPGGGYGGSRGSSGAGPKIEEVD 655          
The following BLAST results are available for this feature:
BLAST of CN192193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH3.027e-8081.91Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP71_SOLLC2.170e-7882.16Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP72_ARATH4.833e-7877.37Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP72_SOLLC6.313e-7881.08Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY1.077e-7779.26Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH1.077e-7779.57Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL4.524e-7680.33Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE3.830e-7579.03Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN5.176e-7273.51Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA1.410e-6970.53Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006I03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192193 ID=CN192193; Name=CN192193; organism=Citrus sinensis; type=EST; length=715bp
GAGGCCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATT
AATATTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAG
TTTTCCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACT
GGAAGCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAG
CTGGAGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCT
TGATACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCAT
CTTGTCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATT
GAATTGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCA
AGTTTGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGC
ATAGTTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCAT
CTTCAGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCC
TTTGACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCC
GGTTGTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCATCGATAT
CAAAAGCAACAGTGATCTGAGGAACCCCCCTGGGAGCTGGAGGAATGCCA
GAGAGCTCAAATTTG
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