CN192189

Overview
NameCN192189
Unique NameCN192189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11412 contig Csv1_Contig11412:1029..1729. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_BOVIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Bos taurus GN=DLST PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 103/167 (61.68%), Postives = 126/167 (75.45%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   LQ QP++NAV             I  S+AV T +GLVVPVIRN + MN+ADIE+ I+ L +KA    ++I++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH+IV RP+V+GG V  RPMMY+ALTYDHRLIDGREAV FLR+IK  VE+PR LLLD+
Sbjct:  289 ASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDRPVVIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 455          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_MOUSE (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dlst PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.349e-51
Identity = 103/167 (61.68%), Postives = 124/167 (74.25%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   LQ QP++NAV             I  S+AV T +GLVVPVIRN + MN+ADIE+ IN L +KA    ++I++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH+I  RP+ VGG V  RPMMY+ALTYDHRLIDGREAV FLR+IK  VE+PR LLLD+
Sbjct:  288 ASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIFDRPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 454          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_RAT (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus GN=Dlst PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 103/167 (61.68%), Postives = 123/167 (73.65%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   LQ QP++NAV             I  S+AV T +GLVVPVIRN + MN+ADIE+ IN L +KA    ++I++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH I  RP+ VGG V  RPMMY+ALTYDHRLIDGREAV FLR+IK  VE+PR LLLD+
Sbjct:  288 ASAFALQEQPVVNAVIDDATKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 454          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_PIG (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Sus scrofa GN=DLST PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 103/167 (61.68%), Postives = 125/167 (74.85%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   LQ QP++NAV             I  S+AV T +GLVVPVIRN + MN+ADIE+ I+ L +KA    ++I++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH+IV RP+ VGG V  RPMMY+ALTYDHRLIDGREAV FLR+IK  VE+PR LLLD+
Sbjct:  289 ASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDRPVAVGGKVEIRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 455          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_TAKRU (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial (Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.173e-50
Identity = 101/167 (60.48%), Postives = 122/167 (73.05%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            AA   L +QP +NAV             +  S+AV T KGLVVPVIRN + MNFADIE+ IN L +KA +  +++++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH I QRP+ V G    RPMMY+ALTYDHRL+DGREAV FLR+IK  VE+PR LLLD+
Sbjct:  243 AAAHALTDQPAVNAVIDGATNEIVYRDYVDISVAVATPKGLVVPVIRNVETMNFADIERTINALGEKARNNELAVEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFQRPVAVDGKAEIRPMMYVALTYDHRLVDGREAVTFLRKIKAAVEDPRALLLDM 409          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_HUMAN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 3.173e-50
Identity = 102/167 (61.08%), Postives = 122/167 (73.05%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXI--SIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   LQ QP++NAV             I  S+AV T +GLVVPVIRN + MNFADIE+ I  L +KA    ++I++M GG+FTISNGGV+GSL  TPIINPPQSAILGMH I  RP+ +GG V  RPMMY+ALTYDHRLIDGREAV FLR+IK  VE+PR LLLD+
Sbjct:  287 ASAFALQEQPVVNAVIDDTTKEVVYRDYIDISVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKVEVRPMMYVALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 453          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_AZOVI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Azotobacter vinelandii GN=sucB PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48
Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            AAV  L+ QP +NA              I +AV + +GLVVPV+RNA+ M+ A+IE  IN   KKA  G ++I+EM GG+FTISNGGV+GSLLSTPI+NPPQ+AILGMH I +RPM V G VV  PMMY+AL+YDHRLIDG+EAV FL  +KD++E+P RLLLD+
Sbjct:  235 AAVEALKRQPGVNASIDGNDIVYHGYQDIGVAVSSDRGLVVPVLRNAEFMSLAEIEGGINEFGKKAKAGKLTIEEMTGGTFTISNGGVFGSLLSTPIVNPPQTAILGMHKIQERPMAVNGQVVILPMMYLALSYDHRLIDGKEAVTFLVTMKDLLEDPARLLLDV 399          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_DICDI (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Dictyostelium discoideum GN=odhB PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48
Identity = 94/165 (56.97%), Postives = 123/165 (74.55%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A+   L+ QPI+NA              I++AV   +GLVVPVIRN + ++FADIEKEI  L+  A + +++I++  GG+FTISNGGV+GS+  TPIINPPQSAILGMH+I  RP VV G VV RP+MY+ALTYDHR+IDGREAV FL++IKDV+E P R+LL++
Sbjct:  275 ASTIALKEQPIVNASVEENDIVYHNNVNINVAVSAPRGLVVPVIRNCENLSFADIEKEIGRLSGLARNDALAIEDSIGGTFTISNGGVFGSMFGTPIINPPQSAILGMHAIKDRPYVVNGQVVVRPIMYLALTYDHRIIDGREAVTFLKKIKDVLENPERILLEL 439          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_HAEIN (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Haemophilus influenzae GN=sucB PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48
Identity = 93/165 (56.36%), Postives = 125/165 (75.76%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A V  L+  P +NA              ISIAV T +GLV PV+R+ DK++ A+IEK+I  LA+K  DG ++++++ GG+FTI+NGGV+GSL+STPIINPPQSAILGMH+I +RP+ + G VV RPMMY+AL+YDHRLIDGRE+V FL  IK+++E+P RLLL+I
Sbjct:  245 AVVEALKRYPEVNASIDGDDVVYHNYFDISIAVSTPRGLVTPVLRDCDKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKERPIALNGQVVIRPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLEI 409          
BLAST of CN192189 vs. ExPASy Swiss-Prot
Match: ODO2_RICTY (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi GN=sucB PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 94/165 (56.97%), Postives = 123/165 (74.55%), Query Frame = -1
Query:  207 AAVSGLQNQPIINAVXXXXXXXXXXXXXISIAVGTSKGLVVPVIRNADKMNFADIEKEINTLAKKANDGSISIDEMAGGSFTISNGGVYGSLLSTPIINPPQSAILGMHSIVQRPMVVGGNVVPRPMMYIALTYDHRLIDGREAVFFLRRIKDVVEEPRRLLLDI 701
            A +  L+  P INA              I +AVGT +GLVVPVIR+ADKM+FADIE+ I  LAKKA +G +SI +++GG+F+ISNGGVYGSLLSTPIINPPQS ILG+H   +R +V+ G +  RPMMYIAL+YDHR+IDG+E V FL +IK+++E P +LLL++
Sbjct:  234 ATIEALKLIPSINAEIDGDDLLYKNYYDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKNLIENPEKLLLNL 398          
The following BLAST results are available for this feature:
BLAST of CN192189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
ODO2_BOVIN3.748e-5161.68Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_MOUSE8.349e-5161.68Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RAT1.090e-5061.68Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_PIG1.090e-5061.68Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_TAKRU3.173e-5060.48Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_HUMAN3.173e-5061.08Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_AZOVI2.969e-4858.79Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_DICDI5.065e-4856.97Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_HAEIN6.615e-4856.36Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_RICTY1.925e-4756.97Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006I01_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006I01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192189 ID=CN192189; Name=CN192189; organism=Citrus sinensis; type=EST; length=701bp
CAACCATTTTGGAATAAATTAGTCTCTCATTTCCAATTCAAACTTTGGCC
AGCCGCATTTTAAAAACTCATTCAAAGGGATAAATTAAAATTTAAACCCT
GCAAAACTTCACTCTCATGAGTATCTTATTCTTGAAATTGCAGTGTATGC
AATCCTGGGTATGACCAGAAAATGAGGTATTAAACAAAAAAGCAGCATGG
TTTTCATATGTCAAGGAGCAGCCTGCGGGGTTCCTCGACAACATCTTTAA
TACGGCGCAGGAAGAAAACTGCCTCTCTTCCATCAATCAGCCTATGGTCA
TACGTAAGAGCGATGTACATCATTGGCCTTGGGACAACATTACCACCAAC
AACCATGGGACGTTGCACTATTGAGTGCATACCCAAGATGGCCGACTGAG
GAGGGTTGATGATAGGTGTACTCAGAAGGCTTCCGTAAACACCACCATTA
GATATTGTAAATGAGCCTCCAGCCATCTCATCAATTGATATTGATCCATC
ATTCGCTTTCTTCGCAAGGGTGTTAATCTCTTTTTCGATATCAGCAAAAT
TCATCTTATCGGCATTGCGGATTACTGGAACCACCAGGCCCTTTGAAGTA
CCGACAGCGATACTAATGTCAATATAATCTCTATATATGATATCATCCCC
ATCAATAACTGCATTTATAATAGGCTGATTCTGGAGCCCACTAACAGCAG
C
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