CN192150

Overview
NameCN192150
Unique NameCN192150
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1919 contig Csv1_Contig1919:52..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN192150 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.049e-39
Identity = 92/169 (54.44%), Postives = 116/169 (68.64%), Query Frame = 2 
Query:  242 MISSIKATVPTATINGSDSIFRKRLLSPTQRSLFLPPLQVDSSSKSEFSLS-----RPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQPIER--EEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFW 727
            M+SSIK +  + +   S S+ R     PT+   F P L + +     F+ +     +PLHIS+ S F      K  +K +AYEA++S+P++   E     +AQK+KIGIYFATWWALNVVFNIYNKKVLNA+PYPWLTSTLSLACGSLMML+SWATRIA+ P TDLEFW
Sbjct:    1 MLSSIKPSSSSFSTAISGSVRRS---IPTKLK-FSPLLIIKNCHNQSFNANVVSHQKPLHISSASNF------KREVKVEAYEADRSRPLDINIELPDEQSAQKLKIGIYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFW 159
[Close]
BLAST of CN192150 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.592e-38
Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:  242 MISSIKATVPTATINGSDSIFRKRLLSPTQRS---LFLPPLQVDSSSKSEFSLSRPLHISNVSCFEPVRVQKSLIKCKAYEAEQSQP------IEREEAKSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFW 727
            M+ S+K T     ++    +FR+   S   RS   L  P  ++    ++  ++S+PLH+S+      +R +  +++C+AYEA++S+P          E KS AA+K+KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLA GSLMMLISWA  I E P TD +FW
Sbjct:    1 MVLSVKQT-----LSPKIGLFRRNPSSSLGRSPVSLSFPSTELPK--RTVLAVSKPLHLSS-----SLRAKSPVVRCEAYEADRSEPHPIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLMMLISWAVGIVETPKTDFDFW 159
The following BLAST results are available for this feature:
BLAST of CN192150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH2.049e-3954.44Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH6.592e-3850.29Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006G19_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006G19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192150 ID=CN192150; Name=CN192150; organism=Citrus sinensis; type=EST; length=727bp
GAGGCTTCATCGTGATTTTGGACTGAGGTTTCAGAGTAAAATTTCAATTT
TTATTTAGTAGATTTCGAAGCGAAATCTCTTCTTGTTCTTGTCTTCTCCA
ACGGAGAGAAAAAAAAAAACCACTAAAAAATTAAAATAATAAACAATCAT
TTTTTTTATATAAAAATCCCGTCTTTCTTCTCATCATTGTGAAAGTTTTG
GTTTTGGTTTTTGGTCTTGTGATCTTTTGCGAATTGTCAAAATGATTTCT
TCTATCAAAGCCACTGTACCAACAGCAACGATCAATGGGTCGGATTCAAT
TTTTCGAAAGAGATTGCTTTCACCAACACAGCGATCTCTGTTTCTGCCAC
CATTACAAGTGGACAGCAGTTCCAAATCTGAGTTTTCATTGTCTAGGCCT
CTGCATATCTCGAACGTTTCATGCTTCGAGCCTGTGAGAGTTCAGAAATC
CCTGATAAAATGCAAGGCTTATGAGGCGGAACAGTCTCAGCCGATTGAAA
GGGAAGAAGCGAAATCAGCGGCGGCGCAGAAGGTCAAGATCGGTATATAT
TTTGCGACTTGGTGGGCTTTGAATGTTGTGTTTAATATATACAACAAGAA
AGTCTTGAATGCGTATCCCTATCCTTGGCTGACTTCAACTCTGTCCCTGG
CTTGCGGGTCGTTGATGATGCTGATTTCATGGGCTACCAGAATTGCTGAG
CCCCCAAATACTGATCTTGAGTTCTGG
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