CN192139

Overview
NameCN192139
Unique NameCN192139
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN192139 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.660e-18
Identity = 46/81 (56.79%), Postives = 54/81 (66.67%), Query Frame = 2 
Query:  164 SLTMINGGTSTAPSAPSGIHATVYKILFPVVVAYAIRHVAAAVSMAKVAISFPHIIKGGEPAFSVLVSTFLLDQTFLLPVY 406
            SL M+    +    AP       +K LFPV VA+ I HVAA VSM+KVA+SF HIIK GEPAFSVLVS F + +TF LPVY
Sbjct:  137 SLMMLVSWATRIADAPK-TDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVY 216

HSP 2 Score: 28.8758 bits (63), Expect = 1.660e-18
Identity = 19/57 (33.33%), Postives = 30/57 (52.63%), Query Frame = 1 
Query:  430 GCALTAVTKLKLNMTDLRFFGCLYNKLTMA-A**FKREGVKVSNRSANPFLYLCFSL 597
            GCAL A+T+L  N+T   F G + + L       F ++G+K  + S   + Y C S+
Sbjct:  225 GCALAAITELNFNITG--FMGAMISNLAFVFRNIFSKKGMKGKSVSGMNY-YACLSM 278
[Close]
BLAST of CN192139 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 2 
Query:  233 YKILFPVVVAYAIRHVAAAVSMAKVAISFPHIIKGGEPAFSVLVSTFLLDQTFLLPVY 406
            +K LFPV VA+ I HVAA VSM+KVA+SF HIIK GEPAFSVLVS F+L +TF   VY
Sbjct:  159 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVY 216
The following BLAST results are available for this feature:
BLAST of CN192139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH1.660e-1856.79Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.228e-1468.97Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006G13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192139 ID=CN192139; Name=CN192139; organism=Citrus sinensis; type=EST; length=691bp
AGAGGGCCAAACGCCTCACCACTCCCTCACCACACGCCTCACCACGGCCA
TCAACGGTGACGGCTGAAGGAGTTCCTAGGCAACGATCAACGGCGGCACA
AGGACGGGCTGATCTCCACCGTCGGCAACGATCAACGAAGGCAGAAGAAC
GGGTTGATCTTCTTCGTTGACAATGATCAACGGCGGCACAAGCACAGCGC
CCTCAGCCCCTTCAGGAATACATGCAACAGTTTATAAAATTTTGTTTCCC
GTTGTTGTGGCATATGCAATTAGGCATGTGGCTGCTGCAGTGAGTATGGC
CAAGGTTGCAATTTCATTCCCTCACATCATTAAGGGTGGAGAGCCTGCTT
TCAGTGTTTTGGTTTCAACATTTCTTCTGGATCAGACATTTCTTTTGCCA
GTTTATATGTCCCTTGTTCCAATGATTTTGGTTGTGCTCTTACTGCTGTG
ACCAAGCTAAAGTTAAACATGACTGATTTGAGATTTTTTGGGTGCCTATA
TAACAAGTTAACAATGGCGGCTTAATAGTTTAAAAGGGAAGGGGTAAAGG
TTTCCAATAGGTCAGCAAACCCATTTCTCTATTTGTGCTTTTCTTTGGAG
CTCTCCTTGGACAGAACTCGATAACTATTGCAAAAACTTGCTGCTGTTTT
TATAAGCATGGATGGTGTTGCCATGACGACAGTTGGAAAAA
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