CN192138

Overview
NameCN192138
Unique NameCN192138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN192138 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.608e-14
Identity = 38/60 (63.33%), Postives = 42/60 (70.00%), Query Frame = -1 
Query:  383 QFINFCFP*LWHMQIRHVAAAVSMSKVAISFPHIIKGGEPAFSVLVSTFILDQTFLLPVY 562
            +F    FP      I HVAA VSMSKVA+SF HIIK GEPAFSVLVS F + +TF LPVY
Sbjct:  157 EFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFFMGETFPLPVY 216

HSP 2 Score: 28.1054 bits (61), Expect = 1.608e-14
Identity = 19/57 (33.33%), Postives = 31/57 (54.39%), Query Frame = -3 
Query:  192 GCALTAVTKLKLNMTDLRFIGCLYNKLTMA-A**FKREGVKVFNRSANPFLYLCFSL 359
            GCAL A+T+L  N+T   F+G + + L       F ++G+K  + S   + Y C S+
Sbjct:  225 GCALAAITELNFNITG--FMGAMISNLAFVFRNIFSKKGMKGKSVSGMNY-YACLSM 278
[Close]
BLAST of CN192138 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = -1 
Query:  383 IRHVAAAVSMSKVAISFPHIIKGGEPAFSVLVSTFILDQTFLLPVY 520
            I HVAA VSMSKVA+SF HIIK GEPAFSVLVS FIL +TF   VY
Sbjct:  171 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPTSVY 216
The following BLAST results are available for this feature:
BLAST of CN192138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPT2_ARATH1.608e-1463.33Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH4.348e-1176.09Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0006G13_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192138 ID=CN192138; Name=CN192138; organism=Citrus sinensis; type=EST; length=574bp
AGAAAGGTAAGGAGTTTTTAAAGTAAAGGCTCAGCACAACTTATTAACAA
CGAATTTATCTTCTTCAGAGGCACTAAGAAATTCATCCACTGCCCAAGTT
TTTCCAACTGTCGTCATGGCAACACCATCCATGCTTATAAAAACAGCAGC
AAGGTTTGCAATAGTTATCGAGTTCTGTCCAAGGAGAGCTCCAAAGAAAA
GCACAAATAGAGAAATGGGTTTGCTGACCTATTGAAAACCTTTACCCCTT
CCCTTTTAAACTATTAAGCCGCCATTGTTAACTTGTTATATAGGCACCCA
ATAAATCTCAAATCAGTCATGTTTAACTTTAGCTTGGTCACAGCAGTAAG
AGCACAACCAAAATCATTGGAACAAGGGACATATAAACTGGCAAAAGAAA
TGTCTGATCCAGAATAAATGTTGAAACCAAAACACTGAAAGCAGGCTCTC
CACCCTTAATGATGTGAGGGAATGAAATTGCAACCTTGGACATACTCACT
GCAGCAGCCACATGCCTAATTTGCATATGCCACAACTACGGGAAACAAAA
ATTTATAAACTGTTGCATGTATTC
back to top