CN192058

Overview
NameCN192058
Unique NameCN192058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10775 contig Csv1_Contig10775:1212..1848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 363.614 bits (932), Expect = 4.772e-100
Identity = 174/210 (82.86%), Postives = 191/210 (90.95%), Query Frame = 1
Query:    7 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            ++LVS +CHK+G +VCIDGTFATPLNQKAL+LGADLV+HSATK+IGGHNDVLAG I GS KLV++IRNLHHVLGG LNPNAAYLIIRGMKTLHLRVQQQNSTA RMAEILEAHPKV  V+YPGL SHPEH +A + MTGFGGVVSFE+DGD+  TIKF+D+LKIPYIAPSFGGCESIVDQPAIMSYWDL   ERLKYGI DNLVRFSFGV
Sbjct:  337 IELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCICGSLKLVSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLRVQQQNSTAFRMAEILEAHPKVSHVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDIETTIKFVDSLKIPYIAPSFGGCESIVDQPAIMSYWDLPQEERLKYGIKDNLVRFSFGV 546          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.482e-45
Identity = 86/209 (41.15%), Postives = 139/209 (66.51%), Query Frame = 1
Query:   16 VSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-SISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            ++++  +K  I   D TFATP+ Q+ L LG D+V HSATK++ GH+D++ G ++ G  K L  Q++ L + +G    P  +++++RG+KTL +R+++    A+++A+ LE HPKVKRV+YPGL SHP+H IA + M  FGG++S E+  DL  T K ++  ++  +A S GG ES+++ PAIM++  +  +ER K GI D  +R S G+
Sbjct:  165 IAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNGHSDIIGGVAVVGDNKTLAEQLKYLQNAIGAIAAPFDSFMVLRGLKTLAIRMERHCENAMQLAQWLEKHPKVKRVYYPGLPSHPQHSIAKKQMRYFGGMISVELKCDLNETKKVLERCQLFTLAESLGGVESLIEHPAIMTHASIPQAERQKLGITDGFIRLSVGI 373          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: CGL_DICDI (Cystathionine gamma-lyase OS=Dictyostelium discoideum GN=cysA PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.482e-45
Identity = 85/213 (39.91%), Postives = 135/213 (63.38%), Query Frame = 1
Query:    1 ARVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            A +K V+D  H +GA + +D TF +P  Q  L LGAD+V+HS TK+I GH+D + G ++  + +L  +++ L + +G   +P   +L +RG+KTLH+R++     A  +   LE HPKV+RV YPGL SHP+H I  + M G+GG+V F V G +  +  F++ +K+  +A S GG ES+++ P++M++  +   ER K GI D L+R S G+
Sbjct:  158 ADIKAVADYVHSRGATLVVDNTFMSPYFQNPLDLGADIVMHSVTKYINGHSDCVMGVLATNNDELYAKLKFLQNSIGAVPSPFDCFLALRGLKTLHVRMEAHQKNAFAICNFLEKHPKVERVIYPGLPSHPQHEICKRQMKGYGGMVVFFVKGSIDQSRSFLENIKLFALAESLGGVESLIELPSVMTHASVPAEERAKLGISDTLIRLSVGI 370          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.362e-43
Identity = 89/211 (42.18%), Postives = 138/211 (65.40%), Query Frame = 1
Query:    7 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            +K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++ + K L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++AE LE    V +V+YPGL SHP H IA + M+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  +    R + GI D L+R S GV
Sbjct:  154 IKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGV 363          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.362e-43
Identity = 89/211 (42.18%), Postives = 138/211 (65.40%), Query Frame = 1
Query:    7 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGK-LVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            +K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++ + K L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++AE LE    V +V+YPGL SHP H IA + M+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  +    R + GI D L+R S GV
Sbjct:  154 IKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGV 363          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.195e-42
Identity = 90/209 (43.06%), Postives = 135/209 (64.59%), Query Frame = 1
Query:   16 VSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIR--NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            V+ +  K GA V +D T+ TP  Q+ L LGADLV+HSATK++ GH D+ AG + GS  LV +IR   L  + G  L+P+ A L++RG+KTL+LR+ +  + A  +AE L   P+V+ +HYPGL S P++ +A Q M+  GG+++FE+ G + A  +F++AL++   A S G  ES+   PA M++   +P ER  YGI + LVR S G+
Sbjct:  172 VAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGL 380          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.661e-42
Identity = 87/200 (43.50%), Postives = 130/200 (65.00%), Query Frame = 1
Query:   40 GAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQ-IRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            G +  +D TFATP  Q  L LGAD+V HS TK++GGH+DV+AG ++ + + + Q I    + +GG L P  ++L+ RG+KTL LR++     AL +AE LE HPKV+RV+YPGL +HP + +A + M GF G++SF +  D  A + F+++LK+  +  S GG ES+V  PA M++  +  ++R   GI D LVR S G+
Sbjct:  164 GLLTIVDNTFATPYYQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNYELAKKQMRGFSGMLSFTLKNDSEA-VAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKTQREAAGIRDGLVRLSVGI 362          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.475e-42
Identity = 88/211 (41.71%), Postives = 137/211 (64.93%), Query Frame = 1
Query:    7 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSIS-GSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            +K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++  S +L  +I  L + +G  L P  ++L+ RG+KTL  R++  ++ A ++AE LEA   V +V+YPGL +H  H IA + MT FGG++SFE+  D  A   F++ L+   +A S GG ES+++ PA+M++  +    R + GI D L+R S GV
Sbjct:  154 IKEISSIAKAHNALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSNELAIEIGFLQNSIGAVLGPQDSWLVQRGIKTLAPRMEAHSANAQKIAEFLEASQAVSKVYYPGLVNHEGHEIAKKQMTAFGGMISFELT-DENAVKNFVENLRYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKDGLIRLSVGV 363          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.743e-42
Identity = 81/210 (38.57%), Postives = 134/210 (63.81%), Query Frame = 1
Query:    7 VKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSISGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            +  ++++ H KGA++ +D  F TP  Q+ L LGAD+V+HSATK+I G    + G ++G G+ + ++       G  L+P  A+L ++G++TL +R+Q  +++AL +AE LE  P ++RV+Y GL SHP+H +A +  +GFG VVSF+V G   A  +FIDA ++  I  + G  ++ +  PA  S+  LSP +R + GI D+L+R + G+
Sbjct:  177 IAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVGFLRTAGPTLSPFNAWLFLKGLETLRIRMQAHSASALALAEWLERQPGIERVYYAGLPSHPQHELARRQQSGFGAVVSFDVKGGRDAAWRFIDATRMVSITTNLGDTKTTIAHPATTSHGRLSPEDRARAGIGDSLIRVAVGL 386          
BLAST of CN192058 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.118e-40
Identity = 84/209 (40.19%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   13 LVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGSI-SGSGKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKRVHYPGLKSHPEHHIATQXMTGFGGVVSFEVDGDLTATIKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSPSERLKYGIMDNLVRFSFGV 636
            L++D+  K G ++ +D TF TP  Q+ L+LGAD+VLHSATK++GGH+DV+ G + + S +L  ++  + +  GG L P  ++L++RG+KTL LR++  +  A ++A  LE HP V+ ++YPG  +HP H +A     GFGG++SF++ G       F+  LK+  IA S G  ES++  PA M++  +    RL+ GI D L+R S G+
Sbjct:  155 LMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLVVTASKELGEELHFVQNSTGGVLGPQDSWLLMRGIKTLGLRMEAIDQNARKIASFLENHPAVQTLYYPGSSNHPGHELAKTQGAGFGGMISFDI-GSEERVDAFLGNLKLFTIAESLGAVESLISVPARMTHASIPRERRLELGITDGLIRISVGI 362          
The following BLAST results are available for this feature:
BLAST of CN192058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
METB_ARATH4.772e-10082.86Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
METC_COXBU7.482e-4541.15Cystathionine beta-lyase OS=Coxiella burnetii GN=m... [more]
CGL_DICDI7.482e-4539.91Cystathionine gamma-lyase OS=Dictyostelium discoid... [more]
METC_LACLM5.362e-4342.18Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA5.362e-4342.18Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
MEGL_PSEPU1.195e-4243.06Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
METB_HELPY2.661e-4243.50Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
METC_LACLC3.475e-4241.71Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METZ_PSEAE7.743e-4238.57O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]
MCCB_BACSU1.118e-4040.19Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192058 ID=CN192058; Name=CN192058; organism=Citrus sinensis; type=EST; length=637bp
GCGAGGGTCAAACTGGTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGT
TTGCATAGATGGAACCTTTGCCACACCTCTCAATCAGAAGGCCCTCAGCC
TTGGTGCTGATCTTGTCCTGCACTCTGCAACAAAATTCATTGGTGGCCAC
AATGATGTCCTTGCTGGGAGCATTAGTGGTTCAGGGAAGTTAGTTACACA
AATTCGTAATTTGCATCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCG
CATATTTGATCATTCGAGGCATGAAGACATTGCATCTTCGTGTACAGCAA
CAAAATTCAACTGCGTTGAGGATGGCCGAGATTTTAGAGGCACATCCAAA
GGTGAAGCGCGTTCACTATCCAGGCTTGAAGAGTCATCCTGAGCATCACA
TTGCCACACAGCANATGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTG
GATGGAGACCTAACGGCCACCATAAAATTTATTGATGCCTTGAAAATCCC
ATATATTGCTCCATCCTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAG
CTATAATGTCGTATTGGGACCTTAGCCCATCGGAGAGGCTCAAGTATGGG
ATTATGGATAACTTGGTTCGCTTTAGCTTTGGAGTGG
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