CN192045

Overview
NameCN192045
Unique NameCN192045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192045 vs. ExPASy Swiss-Prot
Match: CTBL1_RAT (Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.214e-39
Identity = 84/194 (43.30%), Postives = 132/194 (68.04%), Query Frame = 1
Query:   31 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKP 600
            G+ R  +A  +   D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V L+ + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++  V+ LLVQN++RL   +S  +E   V+NTLA +EN+ E +P
Sbjct:   39 GRYREDEATAAEDADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELSAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLD--ESVREEADGVHNTLAIVENMAEFRP 230          
BLAST of CN192045 vs. ExPASy Swiss-Prot
Match: CTBL1_HUMAN (Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.198e-39
Identity = 84/194 (43.30%), Postives = 131/194 (67.53%), Query Frame = 1
Query:   31 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKP 600
            G+ R  +  +    D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V LN + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++  V+ LLVQN++RL   +S  +E   V+NTLA +EN+ E +P
Sbjct:   39 GRYREEEMTVVEEADDDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLD--ESVKEEADGVHNTLAIVENMAEFRP 230          
BLAST of CN192045 vs. ExPASy Swiss-Prot
Match: CTBL1_MOUSE (Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.721e-38
Identity = 83/194 (42.78%), Postives = 130/194 (67.01%), Query Frame = 1
Query:   31 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKP 600
            G+ R  +A  +         LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V L+ + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL+DAL++  V  LLVQN++RL   +S  +E   V+NTLA +EN+ E +P
Sbjct:   39 GRYREEEATAAEDTADDKKRLLQIIDRDGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELSAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVAALLVQNLERLD--ESVREEADGVHNTLAIVENMAEFRP 230          
BLAST of CN192045 vs. ExPASy Swiss-Prot
Match: CTBL1_BOVIN (Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 3.554e-38
Identity = 83/194 (42.78%), Postives = 130/194 (67.01%), Query Frame = 1
Query:   31 GKRRRTDAVLSNGNDKIDPSLLEAL----EKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKP 600
            G+ R  +  +    D     LL+ +    E+ +   E LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  +V LN + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL DAL++  V+ LLVQ+++RL   +S  +E   V+NTLA +EN+ E +P
Sbjct:   39 GRYREEEMTVVEEADDDKKRLLQIIDREGEEEEEEEEPLDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLTDALVDGQVVALLVQDLERLD--ESVKEEADGVHNTLAIVENMAEFRP 230          
BLAST of CN192045 vs. ExPASy Swiss-Prot
Match: YLO6_SCHPO (Uncharacterized protein C1952.06c OS=Schizosaccharomyces pombe GN=SPAC1952.06c PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20
Identity = 61/193 (31.61%), Postives = 107/193 (55.44%), Query Frame = 1
Query:   22 ESGGKRRRTDAVLSNGNDKIDPSLLEALEKSQSSVEALDLRT--VKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEV 594
            E GG+         +G  K + ++L+ L++ ++  E   L    +K++V+  E+ +  N E R+KY   P++F ++E DL  E+    VL+  P L P  + L+ + + L L++H+N DI I V+ LL +LTDEDV   + +    L  +LI++ +L LL   I+R    +S+ ++   VY  L+ +ENL+ V
Sbjct:   48 EEGGR------FFGSGLKKSEKTVLDFLDEQEAQEEPASLTPTELKRMVVRLEKTINNNQELRIKYSTSPQRFIESEADLDLEIRSFNVLSEYPILIPIFLKLDCVSTFLELMNHENADITITVLELLIELTDEDV---DPDALNSLFTSLIDSGLLPLLSNTIKRFD--ESNEEDRHGVYCVLSLMENLLSV 229          
The following BLAST results are available for this feature:
BLAST of CN192045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CTBL1_RAT3.214e-3943.30Beta-catenin-like protein 1 OS=Rattus norvegicus G... [more]
CTBL1_HUMAN4.198e-3943.30Beta-catenin-like protein 1 OS=Homo sapiens GN=CTN... [more]
CTBL1_MOUSE2.721e-3842.78Beta-catenin-like protein 1 OS=Mus musculus GN=Ctn... [more]
CTBL1_BOVIN3.554e-3842.78Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNB... [more]
YLO6_SCHPO1.959e-2031.61Uncharacterized protein C1952.06c OS=Schizosacchar... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E03_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192045 ID=CN192045; Name=CN192045; organism=Citrus sinensis; type=EST; length=600bp
GAGGGGCAGGGTTTAGAAATGGAAAGCGGCGGCAAACGGAGACGAACCGA
CGCCGTTCTATCGAACGGCAACGACAAGATCGACCCTTCTCTTCTAGAAG
CCCTCGAGAAATCGCAATCAAGCGTGGAAGCACTCGACCTACGCACCGTG
AAGAAGCTGGTGCTATCCTTCGAGCGACGTCTCAAAGAAAACATAGAGGC
GCGTCTCAAATACCCCGACCAGCCCGAGAAATTCGCCGACACCGAAGTCG
ACCTACACGAGGAACTCGAGAAGCTCAAAGTCCTCGCTGGTGGGCCCGAG
CTATACCCCGACGTCGTGAATCTGAACGTCATCCCTTCCATCCTCGGCCT
CCTCTCGCACGACAACACCGACATTGCAATCGATGTCGTCCACTTGTTGC
AAGACCTGACCGACGAGGACGTGCTGGAGGATAACGACGAACCCGCCCGC
GTGCTGGTCGACGCCTTGATCGAGAACAACGTCTTAGAATTATTGGTTCA
GAATATACAGAGGCTATCGGATGCTGATTCGGACCCGGATGAGATGGCGG
CTGTGTATAACACTCTGGCTACGATTGAGAATTTGATTGAGGTTAAACCC
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