CN192044

Overview
NameCN192044
Unique NameCN192044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192044 vs. ExPASy Swiss-Prot
Match: CTBL1_BOVIN (Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 3.305e-23
Identity = 72/197 (36.55%), Postives = 103/197 (52.28%), Query Frame = -1
Query:  212 CERFVDVLGLKPAFAAFMGKIPVNKKNKKERSQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAXXXXXXXXXXXXXXXXXXEK-------YNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIEXXXXXXXXXXKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAF 781
            C +FVD+LGL+  F  FM K P  K  K   +++E EE + S++ASL    LRG +R RLL+KF EN+ EK+DRLMEL+ +Y D V+                            Y R+L++GL+ LQ I  I+  +  +  PQ+R R+           K V+ I++EY +NIGD   PE +E  Q RI   +  F
Sbjct:  370 CHKFVDILGLRTIFPLFM-KSP-RKIKKVGTTEKEHEEHVCSILASLLRN-LRGQQRTRLLNKFTENDSEKVDRLMELHFKYLDAVQVADKKIEGEKHDMVRRGEIIDNDIEDEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRESEQKRILALLENF 563          
BLAST of CN192044 vs. ExPASy Swiss-Prot
Match: CTBL1_RAT (Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.640e-22
Identity = 76/212 (35.85%), Postives = 109/212 (51.42%), Query Frame = -1
Query:  212 RALDFAMTKYPPA--CERFVDVLGLKPAFAAFMGKIPVNKKNKKERSQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRY-------SDRVRAXXXXXXXXXXXXXXXXXXEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIEXXXXXXXXXXKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAF 820
            + LD AM     A  C +FVD+LGL+  F  FM K P  K  K   +++E EE + S++ASL    LRG +R RLL+KF EN+ EK+DRLMEL+ +Y         ++                    E Y R+L++GL+ LQ I  I+  +  +  PQ+R R+           K V+ I++EY +NIGD   PE +E  Q RI   +  F
Sbjct:  355 KVLDHAMIGPEGADNCHKFVDILGLRTIFPLFM-KSP-RKIKKVGTTEKEHEEHVCSILASLLRN-LRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDIVRRGEIIDNDMEDEFYLRRLDAGLFILQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRETEQKRILGLLENF 563          
BLAST of CN192044 vs. ExPASy Swiss-Prot
Match: CTBL1_HUMAN (Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.640e-22
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = -1
Query:  212 CERFVDVLGLKPAFAAFMGKIPVNKKNKKERSQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRY-------SDRVRAXXXXXXXXXXXXXXXXXXEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIEXXXXXXXXXXKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAF 781
            C +FVD+LGL+  F  FM K P  K  K   +++E EE + S++ASL    LRG +R RLL+KF EN+ EK+DRLMEL+ +Y         ++                    E Y R+L++GL+ LQ I  I+  +  +  PQ+R R+           K V+ I++EY +NIGD   PE +E  Q RI   +  F
Sbjct:  370 CHKFVDILGLRTIFPLFM-KSP-RKIKKVGTTEKEHEEHVCSILASLLRN-LRGQQRTRLLNKFTENDSEKVDRLMELHFKYLGAMQVADKKIEGEKHDMVRRGEIIDNDTEEEFYLRRLDAGLFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRENEQKRILGLLENF 563          
BLAST of CN192044 vs. ExPASy Swiss-Prot
Match: CTBL1_MOUSE (Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.142e-22
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = -1
Query:  212 CERFVDVLGLKPAFAAFMGKIPVNKKNKKERSQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRY-------SDRVRAXXXXXXXXXXXXXXXXXXEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIEXXXXXXXXXXKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAF 781
            C +FVD+LGL+  F  FM K P  K  K   +++E EE + S++ASL    LRG +R RLL+KF EN+ EK+DRLMEL+ +Y         ++                    E Y R+L++GL+ LQ I  I+  +  +  PQ+R R+           K V+ I++EY +NIGD   PE +E  Q RI   +  F
Sbjct:  370 CHKFVDILGLRTIFPLFM-KSP-RKIKKVGTTEKEHEEHVCSILASLLRN-LRGQQRTRLLNKFTENDSEKVDRLMELHFKYLSAMQVADKKIEGEKHDIVRRGEIIDNDMEDEFYLRRLDAGLFILQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFRETEQKRILALLENF 563          
The following BLAST results are available for this feature:
BLAST of CN192044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CTBL1_BOVIN3.305e-2336.55Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNB... [more]
CTBL1_RAT1.640e-2235.85Beta-catenin-like protein 1 OS=Rattus norvegicus G... [more]
CTBL1_HUMAN1.640e-2236.04Beta-catenin-like protein 1 OS=Homo sapiens GN=CTN... [more]
CTBL1_MOUSE2.142e-2236.04Beta-catenin-like protein 1 OS=Mus musculus GN=Ctn... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006E03_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192044 ID=CN192044; Name=CN192044; organism=Citrus sinensis; type=EST; length=820bp
TTTTTTTTTTTTTTTGCAAGTTCCTACATAATCTATATCACTTTTGTTTG
GATGAGAACTTAAAAGGAACATCAAGATCACTTTGAAATTGCTTTTACCA
GCATATTTATTTAAGGCTCTACAGCGGTAAAAACACCACTGACAAATTCG
TAATTCCAAAACCCTAAACCATACATATTCTCATAGTTTTCCACAGCTAG
AACGATCATCCAAAAGCTGATATGAATTTCTGAATCCTTGCTTGTGCGCG
CTCCTTCTCCTCCGGTCCATCTAAGTCACCAATGTTGTCGTGATATTCCT
GAAGTATATCTTTAACGTCCTTCTTTGTAAGCTTCTGCTGCTTGAGTAAT
AGCTCAATTCTTGTTCTCATTTGAGGTTGCTCAGAGCACCAGAGATGACC
CAGAATAACAGCAATTAACTGAAGAGTGTATAGTCCAGATTCTAGCTTCC
GATTGTACTTTTCTTCTTCATCCATCTCTAGATCATCAAGTTCAAGCTCA
TTCAGTCGATCAGTCTCTGCTCTAACTCTATCAGAATACCTCATATACAG
CTCCATGAGACGGTCAATCTTCTCACATTCATTTTCTATGAATTTACTTA
GCAATCTTTCTCTTCGAGAGCCCCTCAAAATTCCACCAAATAATGATGCA
ATTAGGGACACAAGGCGCTCTTCTAACTCCTCTTGGGACCGCTCTTTCTT
GTTCTTCTTGTTCACAGGAATCTTACCCATAAAAGCAGCAAAGGCGGGCT
TCAAGCCCAAAACATCAACAAATCGTTCACAAGCAGGTGGATACTTGGTC
ATGGCAAAATCAAGTGCCCT
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