CX301810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_HUMAN (Phenylalanyl-tRNA synthetase beta chain OS=Homo sapiens GN=FARSB PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.365e-53 Identity = 112/229 (48.91%), Postives = 152/229 (66.38%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV----DQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DI+ED AIAYGYNN+++T PKT T Q PLN L++LLR+++A +G+TE L+FALCS ++ + L + + AV I+NPKT EF+VARTTLL GLLKT++ ++ +PLP+K+FE+SD+V+ +++VGA N R L A+Y N GFE IHGLLD+IM L V D+ Y + + P FFPG A HP VI FEL PCS++E+NI PFL Sbjct: 363 DIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVI--KASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL 589
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_MOUSE (Phenylalanyl-tRNA synthetase beta chain OS=Mus musculus GN=Farsb PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.509e-52 Identity = 112/228 (49.12%), Postives = 151/228 (66.23%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV---DQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DI+ED AIAYGYNN+++T PKT T Q PLN L++LLR ++A +G+TE L+FALCS ++ + L + + AV I+NPKT EF+VARTTLL GLLKT++ ++ +PLP+K+FE+SDVV+ +VGA N R L A+Y + T GFE IHGLLD+IM L V +++ Y+ + FFPG A HP VI FEL PCS++E+NIEPFL Sbjct: 363 DIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDVVVKDSGKDVGAKNYRHLCAVYYSKTPGFEIIHGLLDRIMQLLDVPPGEESGGYM-IKASAGSAFFPGRCAEIFVGGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL 589
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_PONAB (Phenylalanyl-tRNA synthetase beta chain OS=Pongo abelii GN=FARSB PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.971e-52 Identity = 110/229 (48.03%), Postives = 152/229 (66.38%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV----DQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DI+ED AIAYGY+N+++T PKT T Q PLN L++LLR+++A +G+TE L+FALCS ++ + L + + AV I++PKT EF+VARTTLL GLLKT++ ++ +PLP+K+FE+SD+V+ +++VGA N R L A+Y N GFE IHGLLD+IM L V D+ Y + + P FFPG A HP VI FEL PCS++E+NI PFL Sbjct: 363 DIVEDAAIAYGYSNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISSPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVLPGEDKGGYVI--KASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL 589
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_DROME (Probable phenylalanyl-tRNA synthetase beta chain OS=Drosophila melanogaster GN=CG5706 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.339e-51 Identity = 112/231 (48.48%), Postives = 147/231 (63.64%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRP-DNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV------DQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DI EDVAIAYGYNN++ + P + Q PLN L++ LR ++A +G+TE L+F LCS + L + D AV I NPKT EF+V RTTLL GLLKTL ++ +PLP+K+FE+SDVV+ + +EVGA NERR+ A+ N T+GFE +HGLLD++M L+V YYL + DP++FPG AN HP V+Q FEL PCSAVE IEPF+ Sbjct: 361 DIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLPLKLFEISDVVVADESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKSASGTKGYYL--QATEDPSYFPGRCANVMYDGVVIGKIGVLHPTVLQAFELTTPCSAVEFTIEPFV 589
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_CAEEL (Phenylalanyl-tRNA synthetase beta chain OS=Caenorhabditis elegans GN=frs-2 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.196e-49 Identity = 112/230 (48.70%), Postives = 150/230 (65.22%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAVDQNR----YYLDSRGCTDPTFFPGMRAN-XXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DI EDV +A+GYNNL P++ T P+N L D LR E+A +G+TE L+FALCS + L++PD S AV I NPKT EF+VART+LL GLLKTLS ++++PLP+K+FE+ DV++ +++VGA NERRLAA+Y N +GFE I G LD+IM L V+ R YY+++ + T+FPG A A HP VI +F L PC AVE+N+EPFL Sbjct: 364 DIAEDVGVAFGYNNLITKLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTLSSNRDMPLPLKLFELQDVIVKDSNTDVGARNERRLAAVYYNRAAGFEIIQGFLDRIMRMLNVNPARDGTGYYIEAD--ENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLPCGAVEINVEPFL 591
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_ARATH (Probable phenylalanyl-tRNA synthetase beta chain OS=Arabidopsis thaliana GN=At1g72550 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.568e-48 Identity = 103/237 (43.46%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV-------------DQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 D+MEDVAIAYG+NN+ P ++ LN L+DLLR E+A YTEV+++ LCSHKENF L R D SAV++ NP++ +FE R L+ GLLKT+ + P PIK+FE+SDVV+ + +VGA N R LAA+Y TSGFE IHGL+D+IM +A+ +++ YY+ + +P F PG +A+ HP V+ NF++ PCS +EL+IE L Sbjct: 367 DVMEDVAIAYGFNNIPTRKPASIK---PLTLNELTDLLRIEIAMCVYTEVVTWLLCSHKENFAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVGHNNKYPKPIKIFEISDVVMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVMAIPFLTIHENNVPINEKDGYYV--KLSQEPEFLPGRQASIIVRGKHIGNFGIVHPEVLNNFDIPDPCSYLELDIEAIL 598
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_SCHPO (Phenylalanyl-tRNA synthetase beta chain OS=Schizosaccharomyces pombe GN=SPAC23A1.12c PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45 Identity = 102/236 (43.22%), Postives = 145/236 (61.44%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEIT-PPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV---------DQNRYYLDSRGCTDPTFFPG------MRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNI 675 DIMED+ IAYGY+NL+ T P ++T+G +N L+D++R E+A++G++EV+ F LCSH EN+ +L++ D+ AV +ANPKT EF+V R++LL G+LKT+ +KN LPIK+FEVSDV E NER L AI+ + SGFE IHGLLD++ML L D Y++++ D TFFPG R + HP V++ FEL SAVE+++ Sbjct: 352 DIMEDLGIAYGYDNLKHTYPAHSVTFGKPFEVNRLADIIRNEVAYAGWSEVMPFILCSHDENYAWLRKTDDSKAVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALPIKIFEVSDVAFCDYSRERMTRNERHLCAIFAGLNSGFEQIHGLLDRVMLMLNTKRIMNPKDSDAVGYWIEAE--DDSTFFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEIDL 585
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_DICDI (Phenylalanyl-tRNA synthetase beta chain OS=Dictyostelium discoideum GN=pheSB PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 7.506e-44 Identity = 100/239 (41.84%), Postives = 142/239 (59.41%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGSAVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVL------------NKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKLAV--DQNR-----YYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNI 675 DIMEDVAI YGY+NL+ P T G QP+N LS+LL E+A +G+TE+++F LC +++NF L + D+GS+V I+N + EF RT L+ LLK++S +K PLP+K+FE+SDV + N +S+VGA N+R L AIY N ++ E IHGLLD+IML L + D R YYL+ D F PG N HP V++N+ ++PC+ +EL + Sbjct: 367 DIMEDVAIGYGYDNLKKEIPNCNTIGRVQPINKLSELLANEIALAGFTEIMTFVLCQNRDNFTALNKADDGSSVKISNAVSEEFTEVRTNLVSTLLKSVSANKAAPLPLKMFEISDVSIKGSLGNKDLSDPNSNNSDVGAYNKRMLGAIYCNQSAKIEVIHGLLDRIMLVLDIKLDATRSSNKGYYLEL--SNDKLFLPGTGINVIVNGKRVGHMGIVHPLVLKNYSCSFPCTILELEL 603
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_CANAL (Phenylalanyl-tRNA synthetase beta chain OS=Candida albicans GN=FRS1 PE=2 SV=3) HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42 Identity = 102/240 (42.50%), Postives = 139/240 (57.92%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTY-GGQQPLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKL--------AVDQNRYYLDSRGCTDPTFFPGMRANXXXXXXXXXXXXA------FHPAVIQNFELNYPCSAVELNIEPFL 687 DIMEDVAI YGY+NL+ T P+ + P+N ++D+LR + +GY EV+ L SH ENF +L++ D+G+ AV + NPKT E++V RTTLL G+LKT+ ++ LPIKVFE D+VL + E GA N+R AA+Y TSGFE + GLL +IM + + DQ R Y + TFFPG A A HP V+ NF++ Y S+VE+N E FL Sbjct: 353 DIMEDVAIGYGYDNLKKTKPQAESLVAAPLPVNKVADILRLASSQAGYLEVMPLTLSSHDENFAWLKQKDDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLPIKVFECGDIVLKNPELERGAFNQRNWAALYVGKTSGFEMVQGLLGKIMQTMRTPWLENPSKDQRRGYWIEEDKENTTFFPGRGAKIYFRNADNAEAKAIGSIGVLHPEVMNNFDIPYAASSVEINAEVFL 592
BLAST of CX301810 vs. ExPASy Swiss-Prot
Match: SYFB_YEAST (Phenylalanyl-tRNA synthetase beta chain OS=Saccharomyces cerevisiae GN=FRS1 PE=1 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.161e-36 Identity = 99/246 (40.24%), Postives = 127/246 (51.63%), Query Frame = 1 Query: 16 DIMEDVAIAYGYNNLEITPPKTLTYGGQQ------PLNMLSDLLRYELAFSGYTEVLSFALCSHKENFEYLQRPDNGS-AVVIANPKTTEFEVARTTLLVGLLKTLSCSKNLPLPIKVFEVSDVVLNKKDSEVGAINERRLAAIYTNVTSGFEHIHGLLDQIMLKL---------AVDQNRYYLDSRGCTDPTFFPG------MRANXXXXXXXXXXXXAFHPAVIQNFELNYPCSAVELNIEPFL 687 DIMED A+ YG+NNL PK P+N +SD+ R + + + EVL LCSH ENF++L++ DNG AV +ANPKT E++V RTTLL G+LKT+ ++ LPIKVFE DVV E A NER AAIY SGFE I GLL +IM A R Y + T+FPG R+ HP V+ NF++ + S VE+N E FL Sbjct: 354 DIMEDAAVGYGFNNL----PKGEKLSNANFIAKPLPINKVSDIFRVASSQATWVEVLPLTLCSHDENFKFLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLPIKVFETGDVVFKDDKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIEEDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNFDVPFAASFVEVNAEVFL 595 The following BLAST results are available for this feature:
BLAST of CX301810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301810 ID=CX301810; Name=CX301810; organism=Citrus sinensis; type=EST; length=697bpback to top |