CN192013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYNC1_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arabidopsis thaliana GN=SYNC1 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 3.233e-83 Identity = 145/183 (79.23%), Postives = 159/183 (86.89%), Query Frame = 3 Query: 3 CAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISF 551 CAEAYVK+MC+WLL+ C+ DME MAKN+D CI+RL++VASTPF RITYT +GK F+N VEWGIDLASEHERYLTEV FQKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RIE+MGLP+EPYEWYLDLRR+GTVKH GFGLGFERMI F Sbjct: 368 CAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFERMILF 550
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYNC3_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 1.836e-78 Identity = 142/185 (76.76%), Postives = 154/185 (83.24%), Query Frame = 3 Query: 3 CAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKH-FENKVEWGIDLASEHERYLTEVKF-QKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISF 551 CAEAYVK+MC WL+D C DDME M KN D+ C RL MVA F+R+TYT +GK F+NKVEWGIDLASEHERYLTEV+F QKP+IVYNYPKGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREERYDVIK RIE+MGLP+EPYEWYLDLRR+GTVKH GFGLGFERMI F Sbjct: 365 CAEAYVKYMCKWLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHCGFGLGFERMIQF 549
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_PARUW (Asparaginyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=asnS PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.848e-54 Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 3 Query: 3 CAEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISF 551 CAE Y+K++ ++LD+C +DMEF K+ I+RL V +T FER +YT K K FE V+WG+DL SEHER+L E F KPVI+ +YPK IKAFYMR N+D KTVAAMDVLVPKVGE+IGGSQREER V++S++++ LP E Y WYL+LR+FG+V HSGFG GFER++ F Sbjct: 266 CAEDYLKYILKYVLDNCQEDMEFFNKHVATDLISRLEHVINTSFERASYTYAVRILE---KADKKFEYPVKWGLDLQSEHERFLAEEFFGKPVILTDYPKDIKAFYMRTNEDNKTVAAMDVLVPKVGEIIGGSQREERLSVLESKLKEFNLPAEEYWWYLELRKFGSVPHSGFGAGFERLVQF 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_THEEB (Asparaginyl-tRNA synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=asnS PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.118e-54 Identity = 101/183 (55.19%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AEA+++F+ ++LDHC +DM F + D S + +A+ PF ++Y+ K G+ FE V WG+DL SEHERYL E Q+PVIVY+YP IKAFYMRLNDD KTVAAMD+L PK+GE+IGGSQREER+DV++ RI GL PY WYLDLRR+G+V H+GFGLGFER++ F+ Sbjct: 262 AEAFLQFVFRYVLDHCPEDMAFFQERIDHSVMATAEQMATQPFAHLSYSEAIQVLE---KSGRAFEFPVAWGLDLQSEHERYLAEEYCQRPVIVYDYPAAIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERFDVLQERIVTQGLDPAPYWWYLDLRRYGSVPHAGFGLGFERLVQFM 441
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_PORGI (Asparaginyl-tRNA synthetase OS=Porphyromonas gingivalis GN=asnS PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.118e-54 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE ++K+ W LD+C DD+ F+++++DK I+RL+ V PF R+ YT K G FE + WG DLASEHERYL EV F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+GE+IGGS+RE YD + +R +MG+P + WYLD RR+GT HSGFGLGFER++ F+ Sbjct: 266 AEEFIKYCVQWALDNCMDDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEIIGGSEREADYDKLVARANEMGVPEKDIWWYLDSRRYGTAPHSGFGLGFERLLLFV 448
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_PORG3 (Asparaginyl-tRNA synthetase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=asnS PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.118e-54 Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE ++K+ W LD+C DD+ F+++++DK I+RL+ V PF R+ YT K G FE + WG DLASEHERYL EV F+ PVI+ +YPK IK+FYM+LNDD KTV MDVL PK+GE+IGGS+RE YD + +R +MG+P + WYLD RR+GT HSGFGLGFER++ F+ Sbjct: 266 AEEFIKYCVQWALDNCMDDISFLSEHFDKELIDRLKFVLEKPFVRLAYTEGIRILEEAVKNGVKFEFPIYWGADLASEHERYLVEVHFKTPVIMTDYPKEIKSFYMKLNDDGKTVRGMDVLFPKIGEIIGGSEREADYDKLVARANEMGVPEKDIWWYLDSRRYGTAPHSGFGLGFERLLLFV 448
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SYNP2 (Asparaginyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=asnS PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 7.024e-54 Identity = 104/183 (56.83%), Postives = 129/183 (70.49%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +++++ ++L+ C +DMEF K D S + + + F RITYT K K FE VEWGIDL SEHERYL E F+KP+IV NYPK IKAFYMRLNDD KTVAAMDVL PK+GE+IGGSQREER DV++ RI++M + WYLDLRRFGTV H+GFGLGFER++ F+ Sbjct: 260 AEEFLRYIFKYVLEACPEDMEFFNKRIDNSVLATAQNIIENEFARITYTEAIALLE---KSNKTFEFPVEWGIDLQSEHERYLAEDLFKKPLIVSNYPKDIKAFYMRLNDDQKTVAAMDVLAPKIGEIIGGSQREERLDVLERRIQEMNIEAADLWWYLDLRRFGTVPHAGFGLGFERLVQFM 439
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_ACTSZ (Asparaginyl-tRNA synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=asnS PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.174e-54 Identity = 106/183 (57.92%), Postives = 130/183 (71.04%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AE +K++ + +L DD+EF +K+ DK I RL ++PF +I YT K GK FE V WGIDL+SEHERYL E F+ PV+V NYPKGIKAFYMRLNDD KTVAAMDVL P +GE+IGGSQREER DV+ R+ +MGL E Y WY DLR++GTV HSGFGLGFER+I ++ Sbjct: 267 AEDMLKYVFNAVLTERRDDLEFFSKHVDKDVITRLEHFVNSPFAQIDYTDAIDVLV---KSGKKFEFPVSWGIDLSSEHERYLAEEHFKSPVVVKNYPKGIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDKRMVEMGLKPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYV 446
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SALTY (Asparaginyl-tRNA synthetase OS=Salmonella typhimurium GN=asnS PE=3 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.044e-53 Identity = 105/183 (57.38%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AEA +K++ + +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I+++ Sbjct: 266 AEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTDAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445
BLAST of CN192013 vs. ExPASy Swiss-Prot
Match: SYN_SALCH (Asparaginyl-tRNA synthetase OS=Salmonella choleraesuis GN=asnS PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.044e-53 Identity = 105/183 (57.38%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 6 AEAYVKFMCDWLLDHCFDDMEFMAKNYDKSCINRLRMVASTPFERITYTXXXXXXXXXXKEGKHFENKVEWGIDLASEHERYLTEVKFQKPVIVYNYPKGIKAFYMRLNDDLKTVAAMDVLVPKVGELIGGSQREERYDVIKSRIEDMGLPLEPYEWYLDLRRFGTVKHSGFGLGFERMISFL 554 AEA +K++ + +L+ DDM+F A+ DK I RL ST F ++ YT GK FEN V WG+DL+SEHERYL E F+ PV+V NYPK IKAFYMRLN+D KTVAAMDVL P +GE+IGGSQREER DV+ +R+ +MGL E Y WY DLRR+GTV HSGFGLGFER+I+++ Sbjct: 266 AEAMLKYVFNAVLEERADDMKFFAERVDKDAIARLERFVSTDFAQVDYTEAVAILERC---GKTFENPVFWGVDLSSEHERYLAEEHFKAPVVVKNYPKEIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYV 445 The following BLAST results are available for this feature:
BLAST of CN192013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 301
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Sequences
The
following sequences are available for this feature:
EST sequence >CN192013 ID=CN192013; Name=CN192013; organism=Citrus sinensis; type=EST; length=571bpback to top |