CN191970

Overview
NameCN191970
Unique NameCN191970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9942 contig Csv1_Contig9942:657..1426. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_SCHPO (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC17A5.15c PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.381e-51
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = -2
Query:  161 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDGR 769
            KIIDPV PRHTAV     V  T+ +GP  P+    PRHKK    G K + +   I I+ ADAQ    +EE+TLMDWGNA V+EI+RD  G VT L   LHL+G  K T+ K+TWL +T +   + LV FDYLITK KLEEGE++ D L P T F +    D  ++NLK+G+I+Q+ERKGY+  DVPF       VLF IPDG+
Sbjct:  507 KIIDPVAPRHTAVESGDVVKATIVNGPAAPYAEDRPRHKKNPELGNKKSIFANEILIEQADAQSFKQDEEVTLMDWGNAYVREINRDASGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYKDFLTPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVDVPF--DGTQAVLFNIPDGK 707          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_YEAST (Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=GUS1 PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 6.599e-47
Identity = 94/203 (46.31%), Postives = 133/203 (65.52%), Query Frame = -2
Query:  161 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDGR 769
            K+IDP+ PRHTA++   ++ L  ++ P +P + + P+HKK    GEK   Y K I +D  DA +I+ +EE+TLMDWGN I+ +  ++ DG++      L+LEG  K TK KLTWL +T ++V + LV FD+LITK +LEE E F D L P T F T AI D N++++K G+I+Q ERKGY+R D    +  KP V F IPDG+
Sbjct:  503 KVIDPIAPRHTAIVNPVKIHLEGSEAPQEPKIEMKPKHKKNPAVGEKKVIYYKDIVVDKDDADVINVDEEVTLMDWGNVIITK--KNDDGSMVAK---LNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHTDAIADLNVKDMKIGDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_DICDI (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=gluS PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.353e-36
Identity = 78/202 (38.61%), Postives = 120/202 (59.41%), Query Frame = -2
Query:  164 IIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWL-PETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDG 766
            +++P CPR+TA+ +   V  TL++GP  P V+   ++ K    G K  T++  + ++  D   I   EE+TLM+WGNAIV+ + R+++G+V  ++G LHLEG VK T  KL+WL  +  + V + L  +DY+ITK KLE+G+D     N  ++FE  A  D N+  LK  + +Q ER+G+F  D       KP +L  IP G
Sbjct:  527 VLEPTCPRYTAIAKATAVKFTLSNGPTLPEVKDCLKYAKDPSMGTKKVTFSNNLLLEGDDCNQIKEGEEVTLMNWGNAIVETLQRNENGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDLDTFTNKNSKFEIEAFTDENILTLKLNDKIQFERRGFFNVD-QVGDGVKPYILIYIPSG 727          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEP_DROME (Bifunctional aminoacyl-tRNA synthetase OS=Drosophila melanogaster GN=Aats-glupro PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.591e-32
Identity = 73/216 (33.80%), Postives = 122/216 (56.48%), Query Frame = -2
Query:  149 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWL---PETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVP------FTRSSKPVVLFAIPDGRQQAV 769
            K+IDP+ PR+TA+ +++RV++ +     +     +  H K E  G+K      RI+ID+ DA+ +   E  T ++WGN +++++++D  GN+T +   L+LE       LKLTWL    + +       V FD +I+K  L + EDF   +   TR E   +GD  ++  K+G+I+QL+R+G+F+ DV       +T    P+VLF+IPDG  + V
Sbjct:  504 KVIDPIAPRYTALEKEKRVIVNVAGAKVERIQ--VSVHPKDESLGKKTVLLGPRIYIDYVDAEALKEGENATFINWGNILIRKVNKDASGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAVLGKDEDFKQFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPSPIVLFSIPDGHTKDV 717          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEP_MOUSE (Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus GN=Eprs PE=2 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.745e-31
Identity = 71/210 (33.81%), Postives = 122/210 (58.10%), Query Frame = -2
Query:  164 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNL--TLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPVVLFAIPDG 769
            K+IDPV PR+ A+++   V + + D  ++  ++ + RH K    G K   Y+ +++I+ ADA+  S  E +T ++WGN  + +I ++ DG +T L   L+LE        K+TWL E+   +++    V +++LITK  L + EDF   +N  ++ E   +GD  +++LK+G+I+QL+R+G+F CD P+   S       P +L  IPDG
Sbjct:  498 KVIDPVAPRYVALLKKEVVPVNVLDAQEE--MKEVARHPKNPDVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNINITKIHKNADGKITSLDAKLNLENKDYKKTTKITWLAESTHALSIPAVCVTYEHLITKPVLGKDEDFKQYINKDSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCREAPCILIYIPDG 705          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEP_HUMAN (Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5)

HSP 1 Score: 130.954 bits (328), Expect = 7.330e-30
Identity = 69/210 (32.86%), Postives = 121/210 (57.62%), Query Frame = -2
Query:  164 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTL--VGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSS------KPVVLFAIPDG 769
            K+IDPV PR+ A+++   + + + +  ++  ++ + +H K    G K   Y+ +++I+ ADA+  S  E +T ++WGN  + +I ++ DG +  L   L+LE        K+TWL ET   + + +  V +++LITK  L + EDF   +N  ++ E   +GD  +++LK+G+I+QL+R+G+F CD P+   S       P VL  IPDG
Sbjct:  498 KVIDPVAPRYVALLKKEVIPVNVPEAQEE--MKEVAKHPKNPEVGLKPVWYSPKVFIEGADAETFSEGEMVTFINWGNLNITKIHKNADGKIISLDAKLNLENKDYKKTTKVTWLAETTHALPIPVICVTYEHLITKPVLGKDEDFKQYVNKNSKHEELMLGDPCLKDLKKGDIIQLQRRGFFICDQPYEPVSPYSCKEAPCVLIYIPDG 705          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_ENCCU (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU02_1210 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18
Identity = 60/199 (30.15%), Postives = 104/199 (52.26%), Query Frame = -2
Query:  194 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCD-------VPFTRSSK 769
            K IDPV  R+  V +   V +++ +  +  +   +P+HKK    G K   Y+ +I +   D +++  NEE TLM+WGNAIVK     ++G VT++   L+ +G  K TK K++W+ +    V + L  +  L+     E+ ED     N  +  +     +S + N++ GE++Q ER G++ CD       +PFT+  +
Sbjct:  448 KKIDPVSARYFCVQQRDAVEVSIDNTSE--YTMDVPKHKKNGDLGTKEVFYSSQILLSQEDGRVLQDNEEFTLMNWGNAIVKS-KTVENGTVTKMEVSLNPDGDFKLTKNKMSWVSKRGS-VTVELAEYGNLMND---EDTEDLALRFNRNSVKKEYWYAESAIINVREGEVIQFERNGFYYCDGFLVFNLLPFTKQKR 639          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_NOSCE (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_102160 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17
Identity = 65/200 (32.50%), Postives = 102/200 (51.00%), Query Frame = -2
Query:  194 KIIDPVCPRHTAVIEDRRVLLTLTDGPDKPFVRIIPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRG-EILQLERKGYFRCD-------VPFTRSSK 769
            K+IDP+ PR  AV +   V + +T+     + + IP +KK    G K   ++  +     D  ++  NEE TLM+WGNAIV E    ++  VT+L   LHLEG  K+T  K++W+ E+     +T  G +Y     KL   E+F    N  ++ +     +S++ NL    + +Q ER G+F CD       VPFT+  +
Sbjct:  425 KVIDPLSPRFMAVEKINCVRVFITNFEGLKYTKNIPLNKKNTSLGSKDVLFSDTLLFSQEDGFVLKENEEFTLMNWGNAIV-EKKVVENSIVTELYIKLHLEGDYKSTTNKISWVSESGA---VTATGIEY----GKLLVNEEF----NINSKIDKQYYVESSITNLSTDMKHVQFERIGFFYCDSPCVFHLVPFTKQKR 612          
BLAST of CN191970 vs. ExPASy Swiss-Prot
Match: SYEC_ENTBH (Probable glutamyl-tRNA synthetase, cytoplasmic OS=Enterocytozoon bieneusi (strain H348) GN=EBI_22577 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.531e-14
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = -2
Query:  155 IPRHKKYEGAGEKATTYTKRIWIDHADAQLISANEEITLMDWGNAIVKEISRDQDGNVTQLSGFLHLEGSVKTTKLKLTWLPETNELVNLTLVGFDYLITKKKLEEGEDFLDVLNPCTRFETAAIGDSNMRNLKRGEILQLERKGYFRCDVPFTRSSKPVVLFAIPDGRQQ 667
            IP+ KK    G K    +  I I   DA +++ NEE TLM+WGN  VKE  +  +G + ++    +L G VKTTK KLTW+ + N ++   ++ +D L   K     ++  +  N  ++ E   +G+  + ++     +Q+ER G+F CD       KP+    IP  +Q+
Sbjct:  470 IPKFKKNLSLGNKTIIKSSHILISQEDANILNNNEEFTLMNWGNMKVKE-KQIVNGIIIKIILEENLAGDVKTTKNKLTWVNKEN-IIEFKILEYDTLQNDKNT---DNLAEKFNTNSKKEEIWLGEKALISVSPKTYIQIERIGFFICD-------KPLEFILIPYTKQK 628          
The following BLAST results are available for this feature:
BLAST of CN191970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
SYEC_SCHPO3.381e-5150.74Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_YEAST6.599e-4746.31Glutamyl-tRNA synthetase, cytoplasmic OS=Saccharom... [more]
SYEC_DICDI2.353e-3638.61Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEP_DROME4.591e-3233.80Bifunctional aminoacyl-tRNA synthetase OS=Drosophi... [more]
SYEP_MOUSE1.745e-3133.81Bifunctional aminoacyl-tRNA synthetase OS=Mus musc... [more]
SYEP_HUMAN7.330e-3032.86Bifunctional aminoacyl-tRNA synthetase OS=Homo sap... [more]
SYEC_ENCCU2.212e-1830.15Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_NOSCE3.194e-1732.50Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
SYEC_ENTBH2.531e-1430.99Probable glutamyl-tRNA synthetase, cytoplasmic OS=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006C09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191970 ID=CN191970; Name=CN191970; organism=Citrus sinensis; type=EST; length=770bp
CCCTTTTTTAAACAGTAATCAATTAATTAAGTCAACAGCGGTTCAAAAAT
ATGCGAATGGAAATGTAAGAAATAAAGTTTCCCAATCACAGCTAAATAAA
CTCATAAAGACAGTGGACACCTTAATAAGTATAAAGGTTTTACTTAAAGA
CTGCTTGCTGGCGCCCATCTGGGATTGCAAAGAGAACCACTGGCTTTGAA
GATCTGGTAAAAGGAACATCGCATCTGAAGTAGCCCTTCCTCTCCAGTTG
CAAAATCTCTCCCCGCTTCAGATTCCGCATGTTTGAATCTCCAATAGCTG
CAGTCTCAAATCTTGTACAGGGGTTGAGCACATCAAGGAAGTCCTCTCCT
TCTTCCAGCTTCTTCTTTGTGATTAGATAGTCAAAGCCAACCAATGTGAG
GTTAACTAACTCATTTGTCTCAGGTAGCCATGTGAGCTTCAACTTTGTGG
TCTTGACAGATCCTTCAAGATGCAAAAATCCTGATAATTGTGTAACATTT
CCATCCTGGTCCCTACTAATTTCTTTTACTATGGCATTCCCCCAATCCAT
TAAAGTAATTTCCTCATTCGCAGAAATCAGCTGAGCATCAGCATGGTCTA
TCCATATCCTTTTTGTGTATGTCGTAGCTTTTTCTCCTGCACCTTCATAC
TTCTTATGCCTTGGAATTATGCGCACAAATGGTTTATCAGGGCCATCGGT
TAGAGTCAGCAGTACACGTCTGTCTTCAATGACAGCAGTATGTCTAGGAC
AAACAGGATCAATGATCTTC
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