CN191899

Overview
NameCN191899
Unique NameCN191899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7999 contig Csv1_Contig7999:104..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CN191899 vs. ExPASy Swiss-Prot
Match: Y4966_ARATH (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 2 
Query:  227 SYLWRKYADYVYTKWERTLIWDMIEPYRRPKSFTPLVSIYVAAFYTGVIAAAINEQLYKEKYWEDHPGEAVPLMRPTFYGGPWKVYKG 490
            S LWRKYADY Y K+ER  +W+MIEPYRRPK+FT L++IYVAAFYTGVI AA+ EQLYKEK+WE+HPG+ VPLM+P FY GPW+VY+G
Sbjct:    6 SQLWRKYADYKYNKFERFAVWEMIEPYRRPKTFTTLITIYVAAFYTGVIGAAVTEQLYKEKFWEEHPGKTVPLMKPVFYRGPWRVYRG 93
The following BLAST results are available for this feature:
BLAST of CN191899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4966_ARATH1.279e-3672.73Uncharacterized protein At4g29660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0006A12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191899 ID=CN191899; Name=CN191899; organism=Citrus sinensis; type=EST; length=637bp
GAGGAGCGCTCCGAAGTCCAAACGCAATCCTGCAGCGTGAATTGACACCC
GCTGCTGAGTTGCGCCGCCGCTTCACGGCTGTCACCACTGACCTTCAAAA
GCTTCATTTACGGCAGACAGTGGATAATTTTGGCAGCTTAGGTGGCGGGA
CATAGGGTTTATTGAGGGGCCGTCCAAGGGCAGTGTGGGTGGCAGCGGAA
GTCAAAGGGGGAGGTTGGAAATGGCGAGTTACTTATGGAGAAAATACGCG
GACTATGTGTACACAAAGTGGGAAAGAACACTAATTTGGGACATGATAGA
GCCCTACAGAAGACCCAAATCTTTCACACCCCTTGTCAGTATCTATGTTG
CTGCTTTCTACACTGGTGTGATTGCCGCTGCTATTAACGAGCAACTCTAC
AAGGAGAAGTATTGGGAAGATCACCCTGGTGAAGCTGTGCCGCTCATGCG
GCCAACATTTTATGGTGGTCCCTGGAAGGTTTACAAGGGGGGATACCCTG
CCGCAAAATATGTGAATTGGAGTCGTGTTGAAGCTACTTCCTTTCTACTT
GTGTTTATTGTACAAAGGTCACAGGTTTTGGTGGTACGTAGTGATCAAAT
ATTATTCTTGGTAAAAAATAACTTTCAGGTCGAAATG
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