CN191880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.433e-86 Identity = 162/205 (79.02%), Postives = 168/205 (81.95%), Query Frame = 3 Query: 60 FHHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGG--MVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPAXXXXXXXXXXXXXXXPANLDGQG 668 +HHL+ +FW+YQRQEIEQ NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAA LGG +V TASGVPYYYPPMGQP AGPGGMMIGRPA+DP GVYVQPPSQAWQSVWQT NLDGQG Sbjct: 33 YHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQP---AGPGGMMIGRPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQG 234
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.610e-83 Identity = 157/208 (75.48%), Postives = 164/208 (78.85%), Query Frame = 3 Query: 60 FHHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE-----AAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPAXXXXXXXXXXXXXXXPANLDGQG 668 +HHL+ MFW+YQRQEIEQ NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E A G GGMV ASGVPYYYPPMGQP A PGGMMIGRPA+DP+GVY QPPSQAWQSVWQ A NLD QG Sbjct: 46 YHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQP---AVPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGHGNLDSQG 250
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.727e-53 Identity = 106/165 (64.24%), Postives = 123/165 (74.55%), Query Frame = 3 Query: 102 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTP 596 FW Q +EIE+ DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR++++DE G G ATA+G PY Y P G T G GM++G P P Y+ P +WQ P Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAAGYPYGYLPPG--TAPIGNPGMVMGNPGAYPPNPYMGQP------MWQQP 208
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.161e-50 Identity = 106/169 (62.72%), Postives = 123/169 (72.78%), Query Frame = 3 Query: 102 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAG---LGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPA 599 FW Q +EIE+ DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR++++DE G G + A A+G PY Y P G T G GM++G P G Y P Q +WQ A Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAGYPYGYLPAG--TAPIGNPGMVMGNPG----GAYPPNPYMG-QPMWQQQA 223
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 9.079e-49 Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 3 Query: 63 HHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGL-GGMVGATASGVPYYY 467 HH MFW+ Q QEIE DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E G+ G + + PYYY Sbjct: 45 HHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIPSVVGSPPYYY 180
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.417e-38 Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 3 Query: 108 SYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE-IKDEAAGLGGMVGATASGVP-YYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAW 575 +Y +++E +DFKN QLPLARIKKIMKAD DV M+SAEAPI+FAKACE+FI++LT+RSWL AEENKR TLQK+DI+ A+ + +DFL+D+VP+DE I G M GVP YYYPP G+++G P V +G+Y PSQAW Sbjct: 38 NYWIEQMETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDESIATADPGFVAMPHPDGGGVPQYYYPP-----------GVVMGTPMVG-SGMYA--PSQAW 181
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 102 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 506 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 102 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 506 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 102 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 506 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of CN191880 vs. ExPASy Swiss-Prot
Match: NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 102 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 506 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159 The following BLAST results are available for this feature:
BLAST of CN191880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191880 ID=CN191880; Name=CN191880; organism=Citrus sinensis; type=EST; length=764bpback to top |