CN191864

Overview
NameCN191864
Unique NameCN191864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191864 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 5.184e-22
Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = 3 
Query:   36 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL 203
            SSEPKLVEKVQHELLVV+A++LLEKE SGCRALLR+DKV+DLSRMYRLYHKI +GL
Sbjct:  242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGL 297

HSP 2 Score: 23.8682 bits (50), Expect = 5.184e-22
Identity = 8/12 (66.67%), Postives = 12/12 (100.00%), Query Frame = 1 
Query:    7 RDRVSHYLHSAA 42
            R+RV+HYLHS++
Sbjct:  232 RERVAHYLHSSS 243
The following BLAST results are available for this feature:
BLAST of CN191864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CUL1_ARATH5.184e-2285.71Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005P11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191864 ID=CN191864; Name=CN191864; organism=Citrus sinensis; type=EST; length=205bp
AGAGGAAGAGATAGAGTGTCTCATTACCTGCATTCAGCAGCGAGCCAAAA
TTAGTGGAGAAAGTACAACATGAATTGTTGGTGGTGTATGCAACTGAGCT
TCTTGAGAAGGAGCAGTCTGGATGCCGAGCATTGCTTAGAGAAGATAAGG
TGGAGGATCTTTCTAGGATGTATAGGCTTTATCATAAAATACCTAAAGGC
TTGGA
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