CN191863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 8.135e-54 Identity = 103/114 (90.35%), Postives = 108/114 (94.74%), Query Frame = -3 Query: 361 NTKTISQSDHFEFNFKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 702 NTKT+SQ+D FEFN KFTDRMRRIKIPLPPVDERKK+VEDVDKDRRYAIDAA+VRIMK RKVLGH QLVSECVEQLSRMFKPDIKAIKKR ED ITRD+LERDKENPNMFRYLA Sbjct: 625 NTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.712e-19 Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = -3 Query: 361 KTISQSDHFEFNFKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 696 K + D F FN +F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH+ LVSE QL KP +KKR E I RD++ERDK+NPN + Y+A Sbjct: 646 KEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDNPNQYHYVA 759
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 54/116 (46.55%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 361 KTISQSDHFEFNFKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 696 K + D F FN F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK LGH+ LVSE QL KP +KKR E I RD++ERDK++PN + Y+A Sbjct: 646 KEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYMERDKDSPNQYHYVA 759
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 50/118 (42.37%), Postives = 77/118 (65.25%), Query Frame = -3 Query: 361 TKTISQSDHFEFNFKFTDRMRRIKIPL-----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 699 +K+I +SD F FN KF ++ R+K+ PV+E K+ + VD+DR++ I+A++VRIMK RK L H LVSE ++QL F P+ +KKR E I R++LER K++ ++ Y+A Sbjct: 653 SKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEE-KETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 55/116 (47.41%), Postives = 68/116 (58.62%), Query Frame = -3 Query: 361 KTISQSDHFEFNFKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 696 K I D F N F ++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H+ LVSE QL KP +KKR E I RD++ERDKENPN + Y+A Sbjct: 782 KDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 895
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL4_DICDI (Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.357e-16 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = -3 Query: 361 TKTISQSDHFEFNFKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 699 TK I ++D F FN KF+ ++ +IK+ V+E +K E++ DR+Y +DAA+VRIMK RK L H+ L+SE V L F+P +KKR E I +++L RD EN ++ Y+A Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIMKTRKTLAHNLLISELVSLLK--FQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL3_SCHPO (Cullin-3 OS=Schizosaccharomyces pombe GN=cul3 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = -3 Query: 361 KTISQSDHFEFNFKFTDRMRRIKIP------LPPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 696 + ++ D F FN F + RIKI + ERK+ +E VD+ R++ DA +VR+MK RKV H+QL++E QL+ F P IK+R E I R++L+R +N ++ YLA Sbjct: 668 REVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIEALIEREYLQRQADNGRIYEYLA 785
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = -3 Query: 361 QSDHFEFNFKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 684 +++ F N KFT++ R++I V+E K++ E+V+ DR+Y IDAA+VRIMK RK L H L++E ++QL F IKKR E I R+++ RD E + + Y+A Sbjct: 731 KNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = -3 Query: 361 TKTISQSDHFEFNFKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 699 +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMK RK + H+ LV+E +QL F P IKKR E I R++L R E+ ++ Y+A Sbjct: 650 SKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768
BLAST of CN191863 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = -3 Query: 361 TKTISQSDHFEFNFKFTDRMRRIKIPLPPVD------ERKKIVEDVDKDRRYAIDAALVRIMKFRKVLGHHQLVSECVEQLSRMFKPDIKAIKKRREDFITRDFLERDKENPNMFRYLA 699 +K I F N +FT ++ R+KI ERK+ + VD DR++ I+AA+VRIMK RK + H+ LV+E +QL F P IKKR E I R++L R E+ ++ Y+A Sbjct: 650 SKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 768 The following BLAST results are available for this feature:
BLAST of CN191863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN191863 ID=CN191863; Name=CN191863; organism=Citrus sinensis; type=EST; length=704bpback to top |