CN191825

Overview
NameCN191825
Unique NameCN191825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191825 vs. ExPASy Swiss-Prot
Match: MCRS1_MOUSE (Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.985e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -3 
Query:  272 EIILGRATDGIDVDIDLGREGRANKISRRQALIKMEQDGSFFLKNLGKSSMFLNGKEIATGQAGXXXXXXLIEIREMAFVFEINHKSVREYVANATK 562
            EI LGRAT    +D+DL  EG A KISR+Q +IK++ +G FF+ N G+  ++++G+ +  G         ++EI  + FVF IN   +    A A K
Sbjct:  362 EITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAK 458
[Close]
BLAST of CN191825 vs. ExPASy Swiss-Prot
Match: MCRS1_HUMAN (Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.985e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = -3 
Query:  272 EIILGRATDGIDVDIDLGREGRANKISRRQALIKMEQDGSFFLKNLGKSSMFLNGKEIATGQAGXXXXXXLIEIREMAFVFEINHKSVREYVANATK 562
            EI LGRAT    +D+DL  EG A KISR+Q +IK++ +G FF+ N G+  ++++G+ +  G         ++EI  + FVF IN   +    A A K
Sbjct:  362 EITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAK 458
The following BLAST results are available for this feature:
BLAST of CN191825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MCRS1_MOUSE2.985e-1238.14Microspherule protein 1 OS=Mus musculus GN=Mcrs1 P... [more]
MCRS1_HUMAN2.985e-1238.14Microspherule protein 1 OS=Homo sapiens GN=MCRS1 P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005O09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191825 ID=CN191825; Name=CN191825; organism=Citrus sinensis; type=EST; length=570bp
TTTAAACAAATATCTTCCTCACTGTTCTTTAATTTCTTTTCTGGTGAGTA
TAGAGCTATCACTGCCGTATAACGAGTCTTTACATATATGTGAATAAGTC
TTTACATCCGATCCTAATGTAACATTATGTTCCTGTGTATACGATACATT
AGCTCATCGGCGTTGGAAGCTGATAAGTATTTCCAGAGAAACTAAGGGGG
AAAAGGACTACTTTCTCAGATCATGGAACCCGTTCAGACCATTCAAAATT
GGTATTCTTTTCTTGGTTTCTTTTGGTGGCATTTGCCACGTACTCCCTCA
CTGATTTATGATTTATTTCGAACACGAATGCCATTTCCCTGATCTCAATC
AAACTACTTGAACTTAGACTTCCAGCCTGTCCAGTAGCAATTTCTTTGCC
ATTCAAAAACATAGAACTCTTACCAAGATTCTTCAAAAAGAAGGAACCAT
CTTGTTCCATCTTTATAAGTGCCTGTCGTCTAGATATTTTGTTGGCACGC
CCTTCCCTTCCCAAGTCAATATCAACATCAATGCCATCTGTTGCTCTGCC
AAGTATGATCTCAGTTGTCT
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