CN191822
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15 Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = -3 Query: 321 IMGTLVFWTWFPLLVSYLPNWPERVMFVMASFTVTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 731 I+G L+F + L S+ W VT + HI ++ A DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+LR Sbjct: 316 ILGALLFLNFIRFLESHWFVW------------VTQMNHIVMEIDQEAYR---------DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLR 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15 Identity = 57/185 (30.81%), Postives = 90/185 (48.65%), Query Frame = -3 Query: 321 SYQHWTFYPVMCVARVNLYLQTLLLLF--SKRKVPDRALNIMGTLVFW-TWFPLL-------VSYLPNWPERVMFVMASFTVTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 845 ++QH F+ + A + LY Q + F ++K D A I + F+ T+ PLL + ++ + E FV VT + HI ++H + DW Q T ++ S++ DWF G L FQ+EHHLFP +PR K++P+V+ LC KH + Y+S A I +L+ Sbjct: 260 NHQHKYFFLIGPPALLPLYFQWYIFYFVIQRKKWVDLAWMITFYVRFFLTYVPLLGLKAFLGLFFIVRFLESNWFVW----VTQMNHIPMHIDH---------DRNMDWVSTQLQATCNVHKSAFNDWFSGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLK 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = -3 Query: 321 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 602 +NH + G K DW Q + T ++ S ++DWF G L FQ+EHHLFP +PR R+++P+V+ LC KH + Y F A V IR+L+ Sbjct: 339 MNHIPREI--GHEKHRDWASSQLAATCNVEPSLFIDWFSGHLNFQIEHHLFPTMPRHNYRRVAPLVKALCAKHGLSYEVKPFLTALVDIIRSLK 430
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS3_HUMAN (Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = -3 Query: 321 NIMGTLVFWTWFPLL----------VSYLPNW--PERVMFVMASFTVTAIQHIQFC-LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 734 N+ LV W LL +SYLP + P ++F +A + + + +NH + G K DW Q + T ++ S + +WF G L FQ+EHHLFPR+PR +++P+V+ LC KH + Y F A V +R+L+ Sbjct: 284 NLAYMLVCMQWADLLWAASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEI--GHEKHRDWVSSQLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPFLTALVDIVRSLK 432
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_RAT (Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = -3 Query: 321 IMGTLVFWTWFPLLVSYLPNWPERVMFVMASFTVTAIQHI--QFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 731 I+G LVF + L S+ W VT + HI + L+H+ DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + + +L+ Sbjct: 316 ILGALVFLNFIRFLESHWFVW------------VTQMNHIVMEIDLDHY-----------RDWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIVSSLK 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = -3 Query: 321 IMGTLVFWTWFPLLVSYLPNWPERVMFVMASFTVTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 731 I+G L+F + L S+ W VT + HI ++ A DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+L+ Sbjct: 316 ILGALLFLNFIRFLESHWFVW------------VTQMNHIVMEIDQEAYR---------DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLK 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_MOUSE (Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = -3 Query: 321 IMGTLVFWTWFPLLVSYLPNWPERVMFVMASFTVTAIQHI--QFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 731 I+G LVF + L S+ W VT + H+ + L+H+ DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + + +L+ Sbjct: 316 ILGALVFLNFIRFLESHWFVW------------VTQMNHLVMEIDLDHY-----------RDWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALIDIVSSLK 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = -3 Query: 321 IMGTLVFWTWFPLLVSYLPNWPERVMFVMASFTVTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 731 I+G L+F + L S+ W VT + HI ++ A DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+V+ LC KH + Y+ A + IR+L+ Sbjct: 316 ILGALLFLNFIRFLESHWFVW------------VTQMNHIVMEIDQEAYR---------DWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLLRALLDIIRSLK 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.246e-14 Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = -3 Query: 321 LNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 602 +NH + P + DWF Q + T ++ S + DWF G L FQ+EHHLFP +PR L KI+P+VR LC KH + Y+ A I +LR Sbjct: 340 MNHIVMEIDREPYR--DWFSSQLAATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVRSLCAKHGIEYQEKPLLRALQDIIGSLR 431
BLAST of CN191822 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.005e-14 Identity = 55/185 (29.73%), Postives = 88/185 (47.57%), Query Frame = -3 Query: 321 SYQHWTFYPVMCVARVNLYLQTLLLLF--SKRKVPDRALNIMGTL-VFWTWFPLL-------VSYLPNWPERVMFVMASFTVTAIQHIQFCLNHFAANVYLGPPKGNDWFEKQTSGTLDIACSSWMDWFHGGLQFQLEHHLFPRLPRCQLRKISPVVRDLCKKHNMPYRSLSFFEANVWTIRTLR 845 ++QH F+ + A V + Q + F ++K D A I + + T+ PLL + ++ + E FV VT + HI ++H + DW Q T ++ S++ DWF G L FQ+EHHLFP +PR K++P+V+ LC KH + Y+S A I +L+ Sbjct: 260 NHQHKYFFLIGPPALVPFFFQWYVFYFVIQRKKWVDLAWMITFYIRLLLTYVPLLGLKAFLGLYFIVRFLESNWFVW----VTQMNHIPMHIDH---------DRNMDWVSTQLQATCNVHKSAFNDWFSGHLNFQIEHHLFPMMPRHNYHKVAPLVQSLCAKHGIEYQSKPLLSAFADIIHSLK 431 The following BLAST results are available for this feature:
BLAST of CN191822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191822 ID=CN191822; Name=CN191822; organism=Citrus sinensis; type=EST; length=850bpback to top |