CN191818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27 Identity = 78/181 (43.09%), Postives = 102/181 (56.35%), Query Frame = -2 Query: 304 NAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESA-------LQAGDIRHVSKDEXXXXXXAVSDKLHKVKSRRFKR-SAPKPRSKPERAADAKVVEPLLDNSGGESTSCDPELTQRDSGEGDSVSVETVEATLAKTDGGADGS-DVDLELSL 819 NAGP LRP IF+SLL+EACGRIVNPIYGSVGL+WSG W LCQ AVEAV +GEPV +++++A L+ DIRH+SKD+ S L K+RR KR S +++ E +D + S S S E+ GE S V LA + GS ++ L+L+L Sbjct: 55 NAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAESEGKSD--------EASHDSSLSHQSEIVAAHEGESKE-SESNVSEVLAFSPPAVKGSGEIKLDLTL 226
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.214e-25 Identity = 58/86 (67.44%), Postives = 67/86 (77.91%), Query Frame = -2 Query: 592 NAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESAL---------QAGDIRHV-SKDE 819 N GP LRPAIF+SLLYEACGRIVNPIYGSVGL+WSG WHLCQAAVEAV RG PVTP++ ++A+ + DIRHV S+DE Sbjct: 55 NTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTGQAPPFNNKLCDIRHVSSRDE 140
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21 Identity = 59/114 (51.75%), Postives = 70/114 (61.40%), Query Frame = -2 Query: 520 AGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPV--TPLSSESAL-------QAGDIRHVSK------DEXXXXXXAVSDKLHKVKSRRFKRSA 816 +GP LRPAIF+SLLYEACGRIVNP+ GSVGLMWSG W CQAAV+AV G P+ TPL S SA + DIRHV+K D V+ K ++ RFKR + Sbjct: 56 SGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASASHQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRES 169
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = -2 Query: 646 NAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 819 +A P RPA+F+SLLYEACGR VNP+ G++G++W+G W++CQAAVE V RG + P+ Sbjct: 53 SAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.259e-14 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = -2 Query: 646 NAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 819 +A P+ PA+F+SLLYEACGR VNP+ G+VGL+W+G W++CQAAVE V RG + P+ Sbjct: 53 SAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110
BLAST of CN191818 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14 Identity = 33/56 (58.93%), Postives = 45/56 (80.36%), Query Frame = -2 Query: 643 PQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLS 810 P+ RPA+F+SLL+EACGR VNP+ G+VG++W+ WH+CQAAVE V RG + P+S Sbjct: 56 PELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS 111 The following BLAST results are available for this feature:
BLAST of CN191818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN191818 ID=CN191818; Name=CN191818; organism=Citrus sinensis; type=EST; length=820bpback to top |