CN191812

Overview
NameCN191812
Unique NameCN191812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191812 vs. ExPASy Swiss-Prot
Match: MOC2A_ARATH (Molybdenum cofactor synthesis protein 2A OS=Arabidopsis thaliana GN=At4g10100 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.517e-23
Identity = 51/79 (64.56%), Postives = 66/79 (83.54%), Query Frame = 2
Query:  281 SSIQIKVLFFARARDLTGLTDMPLEVSYGSTTQDCLNKLIARFPNLEEIRGCMVLALNEEYTNASVIVNEKDELAIIPP 517
            SS++IKVL FARAR+LTG+ D+ L++  GSTTQ CL++L+ +FP+LEE+R C+VLALNEEYT  S IV  +DELAIIPP
Sbjct:   14 SSVEIKVLLFARARELTGVPDLTLKMPSGSTTQKCLDELVLKFPSLEEVRSCVVLALNEEYTTDSAIVQHRDELAIIPP 92          
BLAST of CN191812 vs. ExPASy Swiss-Prot
Match: MOC2A_ORYSJ (Molybdenum cofactor synthesis protein 2A OS=Oryza sativa subsp. japonica GN=Os02g0558300 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2
Query:  248 NSDSALVDNKESSIQIKVLFFARARDLTGLTDMPLEVSYGSTTQDCLNKLIARFPNLEEIRGCMVLALNEEYTNASVIVNEKDELAIIPP 517
            ++D+      ++ +++KVLFFARARDLTG+T+ P+EV  GST  DCL +++A FP LEEIR  MVLALNEEY      V + DELAIIPP
Sbjct:   16 SADNPTAAAAKAKVKVKVLFFARARDLTGVTEAPVEVPAGSTAGDCLARVLAAFPRLEEIRRSMVLALNEEYAPEDAAVGDGDELAIIPP 105          
BLAST of CN191812 vs. ExPASy Swiss-Prot
Match: MOC2A_ORYSI (Molybdenum cofactor synthesis protein 2A OS=Oryza sativa subsp. indica GN=OsI_07667 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2
Query:  248 NSDSALVDNKESSIQIKVLFFARARDLTGLTDMPLEVSYGSTTQDCLNKLIARFPNLEEIRGCMVLALNEEYTNASVIVNEKDELAIIPP 517
            ++D+      ++ +++KVLFFARARDLTG+T+ P+EV  GST  DCL +++A FP LEEIR  MVLALNEEY      V + DELAIIPP
Sbjct:   16 SADNPTAAAAKAKVKVKVLFFARARDLTGVTEAPVEVPAGSTAGDCLARVLAAFPRLEEIRRSMVLALNEEYAPEDAAVGDGDELAIIPP 105          
BLAST of CN191812 vs. ExPASy Swiss-Prot
Match: MOC2A_MAIZE (Molybdenum cofactor synthesis protein 2A OS=Zea mays GN=VP15 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 2
Query:  293 IKVLFFARARDLTGLTDMPLEVSYGSTTQDCLNKLIARFPNLEEIRGCMVLALNEEYTNASVIVNEKDELAIIPP 517
            +KVLFFARARDLTG+ D  +EV  GST  +CL +++A+FP LEEIRG +VLALNEEY   S  V + DELA+IPP
Sbjct:   15 VKVLFFARARDLTGVADSAVEVPPGSTAGECLARVLAQFPKLEEIRGSVVLALNEEYAADSAAVADGDELAVIPP 89          
The following BLAST results are available for this feature:
BLAST of CN191812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MOC2A_ARATH1.517e-2364.56Molybdenum cofactor synthesis protein 2A OS=Arabid... [more]
MOC2A_ORYSJ2.421e-2155.56Molybdenum cofactor synthesis protein 2A OS=Oryza ... [more]
MOC2A_ORYSI2.421e-2155.56Molybdenum cofactor synthesis protein 2A OS=Oryza ... [more]
MOC2A_MAIZE1.735e-1962.67Molybdenum cofactor synthesis protein 2A OS=Zea ma... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005O02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191812 ID=CN191812; Name=CN191812; organism=Citrus sinensis; type=EST; length=545bp
GCGAGGATTGCCCAACCATTCACATATATGGAAGGGCGAATTTCTTAATT
AATTTTTCACACGTTATAATTTGTTTTTTATTTTTAATTCTCTCGTCGTC
TTCTTTTCCACAGCCCACCGTGCAAGTATTTTCGTACTTATCCCAGCACG
GCGACCTTCTATCCCTGTGCCAGTCAGATGATGCATTTCCATTGACCCAT
GTCCTGGTTCTACGATGGATGTCACAGAAAGAGAAACTAAAACTGGGAAT
TCGGATTCTGCACTTGTTGACAACAAGGAATCCTCTATTCAGATAAAGGT
ATTGTTCTTTGCTAGAGCTCGAGATTTAACTGGCTTGACCGATATGCCAC
TAGAGGTGTCGTATGGTAGTACCACACAAGATTGCTTGAATAAGCTTATT
GCAAGGTTTCCGAACTTAGAAGAGATCCGAGGATGCATGGTTCTTGCTTT
AAATGAGGAATACACAAATGCATCTGTGATTGTTAATGAAAAAGATGAAT
TAGCCATTATACCTCCCCATAAGTGGTGGCTAAATCTTTTCATCT
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