CN191811

Overview
NameCN191811
Unique NameCN191811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length600
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: YF64_CAEEL (Uncharacterized protein R102.4 OS=Caenorhabditis elegans GN=R102.4 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.382e-34
Identity = 76/153 (49.67%), Postives = 102/153 (66.67%), Query Frame = 2
Query:  119 TVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTHANCGGRCLSVE 577
            ++DLRSDTVT P+  MR AMA A V DDV   D T  RLE   A++ GKEAGLFV SGTMGNL++++ HC+ RG E+I+G  +HIH +E G  +   G+   T++   DGTMD++ IE AIR    +   P ++LIC+ENTH   GG+ L +E
Sbjct:   66 SIDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTMGNLLAIMAHCQ-RGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQAIR--VKDCHMPASKLICIENTHNYTGGKALPIE 215          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: LTAA_AERJA (L-allo-threonine aldolase OS=Aeromonas jandaei GN=ltaA PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.675e-29
Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 2
Query:  116 RTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 544
            R +DLRSDTVT+PT+AMR  M  AEV DDV   DP    LE   A ++GKEA LFVPSGTM NL++V+ HC+ RG   ++G  +HI+ YE  G + +G V  + V    DG++ +  + AAI     ++ +  TRL+CLENTH
Sbjct:    2 RYIDLRSDTVTQPTDAMRQCMLHAEVGDDVYGEDPGVNALEAYGADLLGKEAALFVPSGTMSNLLAVMSHCQ-RGEGAVLGSAAHIYRYEAQGSAVLGSVALQPVPMQADGSLALADVRAAI--APDDVHFTPTRLVCLENTH 141          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: LTAE_ECOLI (Low specificity L-threonine aldolase OS=Escherichia coli (strain K12) GN=ltaE PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.591e-28
Identity = 61/141 (43.26%), Postives = 93/141 (65.96%), Query Frame = 2
Query:  122 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 544
            +DLRSDTVT+P+ AM  AM +A V DDV   DPT   L+   A++ GKEA +F+P+GT  NL+++L HCE RG E I+G  +H +++E GG + +G + P+ +    DGT+ +D  + A++    +I +  T+L+ LENTH
Sbjct:    2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSHCE-RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLD--KVAMKIKPDDIHFARTKLLSLENTH 139          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: LTAE_ECO57 (Low specificity L-threonine aldolase OS=Escherichia coli O157:H7 GN=ltaE PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.591e-28
Identity = 61/141 (43.26%), Postives = 93/141 (65.96%), Query Frame = 2
Query:  122 VDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENTH 544
            +DLRSDTVT+P+ AM  AM +A V DDV   DPT   L+   A++ GKEA +F+P+GT  NL+++L HCE RG E I+G  +H +++E GG + +G + P+ +    DGT+ +D  + A++    +I +  T+L+ LENTH
Sbjct:    2 IDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSHCE-RGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLD--KVAMKIKPDDIHFARTKLLSLENTH 139          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: GLY1_SCHPO (Probable threonine aldolase OS=Schizosaccharomyces pombe GN=gly1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15
Identity = 56/141 (39.72%), Postives = 74/141 (52.48%), Query Frame = 2
Query:  125 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENG--GISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 541
            D RSDT+T PT+ MR  M  A   D V   D    +LE  +AK+ GKEA LFV SGT GN + +  H       +I  D +HI+ +E G  G+ T   V P + KNN   T + ++    I     +I +  T LICLENT
Sbjct:   30 DFRSDTLTVPTDEMRRIMYEASDGDCVYEEDEDTRKLEVYVAKLTGKEAALFVTSGTQGNQLCIRSHLHQPPHSIICDDRAHIYNWEAGAIGLFTQAIVRPISPKNNVYITAE-EIENKLILG--NDIHFSPTGLICLENT 167          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: GLY1_YEAST (Low specificity L-threonine aldolase OS=Saccharomyces cerevisiae GN=GLY1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15
Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 2
Query:  104 KMVTRTVDLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 541
            K +T   DLRSDT T PT  M  A   A + D V   D    RLE  +A++ GKEAGLF  SGT+ N I++  H       ++    +H++ +E  G++ +       V  +    + ++ I++      G+I    TRLI LENT
Sbjct:    9 KYITAANDLRSDTFTTPTAEMMEAALEASIGDAVYGEDVDTVRLEQTVARMAGKEAGLFCVSGTLSNQIAIRTHLMQPPYSILCDYRAHVYTHEAAGLAILSQAMVVPVVPSNGDYLTLEDIKSHYVPDDGDIHGAPTRLISLENT 154          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: GLY1_CANAL (Threonine aldolase OS=Candida albicans GN=GLY1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.345e-13
Identity = 49/142 (34.51%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  125 DLRSDTVTKPTEAM-RAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGG--VHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 541
            + RSDT T PT AM      +A   D V   D T  RLE++M ++ GK A LF  SGTM N I +  +       ++    +H+ ++E GG++T+    VHP    N    T + D++     D  G+I    T++I LENT
Sbjct:   14 EFRSDTFTVPTRAMVEDGFMNATFGDSVYQEDETTLRLESKMCEITGKPAALFCVSGTMSNQIGLRANLVQPPYSILCDYRAHVFLHEAGGLATLSQAMVHPVRPSNGNYLTFE-DVLGNVTYDDDGDIHAAPTKVISLENT 154          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: GLY1_ASHGO (Threonine aldolase OS=Ashbya gossypii GN=GLY1 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12
Identity = 42/139 (30.22%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  125 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDIDLIEAAIRDPKGEIVYPTTRLICLENT 541
            D RSDT T PT  M  A  +A + D V   D    +LE  +AK+ G EAG+F  SGT+ N I++  H       ++    +H++ +E  G++ +       V  +    + ++ I+       G+I    T++I LENT
Sbjct:   17 DFRSDTFTTPTREMIEAALTATIGDAVYQEDIDTLKLEQHVAKLAGMEAGMFCVSGTLSNQIALRTHLTQPPYSILCDYRAHVYTHEAAGLAILSQAMVTPVIPSNGNYLTLEDIKKHYIPDDGDIHGAPTKVISLENT 155          
BLAST of CN191811 vs. ExPASy Swiss-Prot
Match: TOXG_COCCA (Alanine racemase TOXG OS=Cochliobolus carbonum GN=TOXG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  125 DLRSDTVTKPTEAMRAAMASAEVDDDVLMHDPTAFRLETEMAKVMGKEAGLFVPSGTMGNLISVLVHCEIRGSEVIIGDNSHIHIYENGGISTIGGVHPRTVKNNQDGTMDI-DLIEAAIRDPKGEIVYPTTRLICLENT 541
            D RSD +T+P+  M +A+    + DDV   D T    E  +A++ G+E G+FV +GTM N + +      R   +++   SH   YE GG S + G   + V+ +    + + DL E AI     ++    T ++ +ENT
Sbjct:   39 DFRSDVITRPSLRMLSAVLKTTLGDDVFREDLTTAHFEAHVAEISGREEGMFVITGTMANQLCLHALVSTRPCGILLSSESHAIHYEAGGSSMLSGAMLQPVQPSNGKYLRVEDLEEHAIL--TDDVHKCPTSIVSMENT 176          
The following BLAST results are available for this feature:
BLAST of CN191811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YF64_CAEEL1.382e-3449.67Uncharacterized protein R102.4 OS=Caenorhabditis e... [more]
LTAA_AERJA8.675e-2947.55L-allo-threonine aldolase OS=Aeromonas jandaei GN=... [more]
LTAE_ECOLI9.591e-2843.26Low specificity L-threonine aldolase OS=Escherichi... [more]
LTAE_ECO579.591e-2843.26Low specificity L-threonine aldolase OS=Escherichi... [more]
GLY1_SCHPO3.200e-1539.72Probable threonine aldolase OS=Schizosaccharomyces... [more]
GLY1_YEAST7.130e-1533.56Low specificity L-threonine aldolase OS=Saccharomy... [more]
GLY1_CANAL1.345e-1334.51Threonine aldolase OS=Candida albicans GN=GLY1 PE=... [more]
GLY1_ASHGO4.325e-1230.22Threonine aldolase OS=Ashbya gossypii GN=GLY1 PE=3... [more]
TOXG_COCCA1.258e-1130.71Alanine racemase TOXG OS=Cochliobolus carbonum GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005O01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005O01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191811 ID=CN191811; Name=CN191811; organism=Citrus sinensis; type=EST; length=600bp
GAGGGTTTAAAGATTCTTGGGTTTCTTTTGTTATTCGAAGGGGGTGCTGT
TAATAAGTGCTATATAGTCCAAAGATTCTTCAGCTGCTTTCAGTGTGTGA
GTGAAAATGGTAACTAGAACTGTGGATCTCCGGTCGGACACCGTCACCAA
ACCCACTGAAGCAATGAGGGCTGCTATGGCAAGTGCTGAGGTTGACGATG
ATGTATTAATGCACGATCCGACTGCATTCCGCTTAGAAACAGAAATGGCG
AAGGTTATGGGCAAGGAAGCTGGTCTGTTTGTGCCGTCAGGCACAATGGG
TAACCTCATTAGTGTGCTTGTTCATTGTGAAATTAGGGGAAGTGAAGTCA
TTATTGGAGACAATTCTCATATTCATATTTACGAGAATGGAGGCATTTCA
ACAATTGGAGGGGTGCATCCAAGGACTGTCAAGAACAACCAAGATGGAAC
AATGGATATTGATTTAATTGAAGCTGCCATTAGAGATCCGAAAGGCGAGA
TTGTGTACCCGACAACTCGACTTATCTGTTTGGAGAATACGCATGCAAAC
TGCGGTGGTAGATGCCTTTCTGTAGAAACACGGACAGTGTTGGAGAGATT
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