CN191802

Overview
NameCN191802
Unique NameCN191802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB1_ARATH (Thioredoxin reductase 1 OS=Arabidopsis thaliana GN=NTR1 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.675e-60
Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = -3
Query:  285 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIGSHEDKSE 734
            KVYIIHRRD+FR SKIMQ RAL+NPKIDVIWNS V+EAYG+              VTG VSDLKVSGLFFAIGHEPATKF+DG ++L SDGY++TKPGTT TSVPGVFAAGDVQDKKYRQA+TAAGTGCMAAL+AEHYLQEIGS + KS+
Sbjct:  184 KVYIIHRRDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQQGKSD 333          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB2_ARATH (Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.732e-60
Identity = 114/150 (76.00%), Postives = 126/150 (84.00%), Query Frame = -3
Query:  285 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEIGSHEDKSE 734
            KVYIIHRRD+FR SKIMQ RAL+NPKI+VIWNS V+EAYG+              VTG VSDLKVSGLFFAIGHEPATKF+DGQL+L  DGY++TKPGTT TSV GVFAAGDVQDKKYRQA+TAAGTGCMAAL+AEHYLQEIGS E KS+
Sbjct:  234 KVYIIHRRDTFRASKIMQQRALSNPKIEVIWNSAVVEAYGDENGRVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGQLELDEDGYVVTKPGTTKTSVVGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQEGKSD 383          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_RICCN (Thioredoxin reductase OS=Rickettsia conorii GN=trxB PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.203e-36
Identity = 81/141 (57.45%), Postives = 92/141 (65.25%), Query Frame = -3
Query:  312 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 734
            KV I+HRRDSFR  KI+Q+R   N KI VIW+ VV E  G                T ++S L  SG+F AIGH P T    GQ+ +  D YIITK GTT TSV GVFAAGDVQDK YRQAVTAAGTGCMAALEAE +L +
Sbjct:  170 KVTIVHRRDSFRAEKILQDRLFKNSKISVIWDHVVDEIVGSNKPKSVTGVKIQNVHTKEISLLNCSGVFIAIGHAPNTGLFTGQIVMDDDNYIITKSGTTRTSVEGVFAAGDVQDKIYRQAVTAAGTGCMAALEAEKFLNK 310          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_CANGA (Thioredoxin reductase OS=Candida glabrata GN=TRR1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.759e-36
Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = -3
Query:  309 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 734
            KVY+I R+D  R S IMQ RA  N KI++++N+V +EA G+               T + +DL V+GLF+AIGH PATK V+GQ++    GYI T PG++ TSVPGVFAAGDVQD KYRQA+T+AG+GCMA L+AE YL E+
Sbjct:  179 KVYLIVRKDHLRASTIMQRRAEQNDKIEILYNTVTLEAQGDGKLLNNLRIKNVK--TNEETDLPVNGLFYAIGHTPATKIVEGQVETDETGYIKTIPGSSLTSVPGVFAAGDVQDSKYRQAITSAGSGCMAGLDAEKYLTEL 318          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_SCHPO (Thioredoxin reductase OS=Schizosaccharomyces pombe GN=trr1 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.373e-36
Identity = 77/142 (54.23%), Postives = 97/142 (68.31%), Query Frame = -3
Query:  309 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 734
            KVY++ RRD  R S IM  R L NPK++V+WN+V  EA G+               T +VSDL+V+GLF+AIGH PATK V  Q++L   GYI T  GT  TS+PG FAAGDVQDK +RQA+T+AG+GC AAL A HYL+E+
Sbjct:  179 KVYVLVRRDKLRASPIMAKRLLANPKVEVLWNTVAEEAQGDGKLLNNLRIKNTN--TNEVSDLQVNGLFYAIGHIPATKLVAEQIELDEAGYIKTINGTPRTSIPGFFAAGDVQDKVFRQAITSAGSGCQAALLAMHYLEEL 318          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_RICFE (Thioredoxin reductase OS=Rickettsia felis GN=trxB PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.428e-35
Identity = 79/141 (56.03%), Postives = 91/141 (64.54%), Query Frame = -3
Query:  312 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 734
            KV I HRRDSFR  KI+Q+R   NPKI VIW+ VV E  G                T ++S +  SG+F AIGH P T    GQ+ +  D YIITK GTT TSV GVFAAGDVQDK YRQAVTAAG+GCMAALE E +L +
Sbjct:  170 KVTITHRRDSFRAEKILQDRLFKNPKISVIWDHVVDEIVGSDKPKSVTGVKIQNVHTKEISLVNCSGVFIAIGHAPNTGLFTGQIAMDDDNYIITKSGTTKTSVEGVFAAGDVQDKIYRQAVTAAGSGCMAALEVEKFLNK 310          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_YARLI (Thioredoxin reductase OS=Yarrowia lipolytica GN=TRR1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = -3
Query:  312 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 734
            KVY+I R+D  R S +M  R  ++PK+++++N V IEA G+               TG+  DL+V+GLF+AIGH PAT  V GQ++   +GY++T PGT +TSV GVFAAGDVQDK+YRQA+T+AGTGCMAAL+ E  L E
Sbjct:  179 KVYVIVRKDKLRASAVMAKRLASHPKVEILFNHVSIEAKGDGKLLNALEIENTL--TGEKRDLEVNGLFYAIGHIPATSIVKGQVETDEEGYVVTVPGTANTSVKGVFAAGDVQDKRYRQAITSAGTGCMAALDCEKLLAE 317          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_DEBHA (Thioredoxin reductase OS=Debaryomyces hansenii GN=TRR1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35
Identity = 74/141 (52.48%), Postives = 93/141 (65.96%), Query Frame = -3
Query:  312 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQE 734
            KVY++ RRD  R S IMQ R   N K++++WNS   EA G+               T +  DL V+GLF+AIGH PAT+    QL+     YI+TKPGT  TS+PGVFAAGDVQDK+YRQA+T+AGTGCMAAL+ E +L E
Sbjct:  179 KVYLLVRRDQLRASNIMQKRVQNNDKLEILWNSEAKEAKGDGKLLQNISVYNNK--TKETKDLPVNGLFYAIGHIPATQIFAKQLETDDQNYILTKPGTAETSIPGVFAAGDVQDKRYRQAITSAGTGCMAALDCEKFLSE 317          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_ASHGO (Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.182e-35
Identity = 75/142 (52.82%), Postives = 100/142 (70.42%), Query Frame = -3
Query:  309 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 734
            KV+++ R+D  R S IMQ R   N KI+V++N+  +EA G+               TG+ SDL V+GLF+AIGH PAT+ V GQ+DL   GY+ T PG+T T+VPG+FAAGDVQD +YRQAVT+AG+GCMAAL+AE +L E+
Sbjct:  179 KVFMLVRKDHMRASTIMQRRVERNEKIEVLYNTAPVEAKGDGSLLDALRVRDTR--TGEESDLPVNGLFYAIGHTPATQLVAGQVDLDESGYVKTVPGSTLTNVPGLFAAGDVQDSRYRQAVTSAGSGCMAALDAEKFLSEL 318          
BLAST of CN191802 vs. ExPASy Swiss-Prot
Match: TRXB_KLULA (Thioredoxin reductase, mitochondrial OS=Kluyveromyces lactis GN=TRR1 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.156e-35
Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = -3
Query:  309 KVYIIHRRDSFRVSKIMQNRALTNPKIDVIWNSVVIEAYGEXXXXXXXXXXXXXXVTGQVSDLKVSGLFFAIGHEPATKFVDGQLDLHSDGYIITKPGTTHTSVPGVFAAGDVQDKKYRQAVTAAGTGCMAALEAEHYLQEI 734
            KVY++ R+D  R S+IMQ RA  N KI++++N V +EA G+               T +  DL V+GLF+AIGH PAT  V GQ+DL   GY+ T PG+T T+VPGVFAAGDVQD +YRQA+T+AG+GCMAAL+AE Y+ E+
Sbjct:  209 KVYMLVRKDHLRASQIMQRRAEQNEKIEILYNHVTLEAKGDGKYLNALKVKNVK--TNEEYDLPVNGLFYAIGHTPATNIVAGQVDLDEAGYVKTVPGSTLTNVPGVFAAGDVQDARYRQAITSAGSGCMAALDAEKYITEL 348          
The following BLAST results are available for this feature:
BLAST of CN191802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
TRXB1_ARATH1.675e-6076.00Thioredoxin reductase 1 OS=Arabidopsis thaliana GN... [more]
TRXB2_ARATH3.732e-6076.00Thioredoxin reductase 2 OS=Arabidopsis thaliana GN... [more]
TRXB_RICCN2.203e-3657.45Thioredoxin reductase OS=Rickettsia conorii GN=trx... [more]
TRXB_CANGA3.759e-3654.23Thioredoxin reductase OS=Candida glabrata GN=TRR1 ... [more]
TRXB_SCHPO8.373e-3654.23Thioredoxin reductase OS=Schizosaccharomyces pombe... [more]
TRXB_RICFE1.428e-3556.03Thioredoxin reductase OS=Rickettsia felis GN=trxB ... [more]
TRXB_YARLI3.182e-3551.77Thioredoxin reductase OS=Yarrowia lipolytica GN=TR... [more]
TRXB_DEBHA3.182e-3552.48Thioredoxin reductase OS=Debaryomyces hansenii GN=... [more]
TRXB_ASHGO3.182e-3552.82Thioredoxin reductase OS=Ashbya gossypii GN=TRR1 P... [more]
TRXB_KLULA4.156e-3552.82Thioredoxin reductase, mitochondrial OS=Kluyveromy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005N18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191802 ID=CN191802; Name=CN191802; organism=Citrus sinensis; type=EST; length=745bp
GAGGGACAATAAGGTAAAGAATAATATATTCTTAAAAAATTCCAACCAAC
AATTACATTCTAAAATGCAGCACTAATACCAACTTAAAACAAATTCCTTA
TCCAATTAGTTTTTCCAACCAACTATTGGAAGCCAATAAATAAGTCACCA
AGACAGTACTGATTCATCACTTGAATTGGTCGAGAAAAGGCCTTCTTCAT
TCAGAGGTAGATTTAGATCAAGTTTGCATGTAGACTATTCTGCTTTCATC
ATATCCCAGCCCTGCCATTATCCTACAGTGAAGATTCACTCTTATCCTCG
TGAGATCCTATCTCTTGCAAGTAATGCTCAGCTTCCAAGGCTGCCATGCA
CCCAGTGCCGGCGGCGGTAACAGCCTGCCTGTACTTCTTATCCTGAACAT
CTCCAGCAGCAAAAACTCCAGGGACACTAGTGTGTGTAGTCCCAGGTTTG
GTAATAATATAACCATCAGAATGCAGGTCCAACTGACCATCCACAAACTT
AGTAGCAGGCTCGTGTCCAATGGCAAAGAACAAGCCAGACACCTTCAAAT
CAGAAACCTGTCCAGTCACCAAATTCTTCACCTTCAATCCTCCCAGAACC
TTCTTATCCCCTTCTCCATAAGCCTCTATAACAACCGAATTCCAAATCAC
ATCAATCTTAGGGTTCGTAAGTGCCCTGTTTTGCATAATCTTCGAAACTC
TAAAACTATCCCTCCTATGAATTATATAAACTTTTTGATCCGTAC
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