CX301615

Overview
NameCX301615
Unique NameCX301615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:864..1602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.312e-101
Identity = 168/240 (70.00%), Postives = 199/240 (82.92%), Query Frame = 1
Query:   16 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYG 735
            KGYWQF+MGDVLIDGE TG+C  GC+AIADSGTSLLAGPT +IT INHAIGA GV+SQ+CK +V QYG+TI+++L++E  P+KICSQ+ LCTFDGTRG SMGIE                  MCS CEM V+WMQN+LR+N+T ++I+NY+N+LCDR+PSP G+SAVDC  LSSMP VSFTIGGK+FDLAP EY+L+VGEG  AQCISGFTAFD+ PPRGPLWILGDVFMGRYHTVFD+G
Sbjct:  265 KGYWQFDMGDVLIDGEPTGFCDGGCSAIADSGTSLLAGPTPVITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHD-GMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFG 503          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 2.009e-98
Identity = 168/240 (70.00%), Postives = 197/240 (82.08%), Query Frame = 1
Query:   16 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYG 735
            KGYWQFEMGDVLI G+TTG+C++GC+AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+V QYG+ IL++L+AETQP KICSQ+GLCTFDG  G S GI+                  MC+ACEMAV+WMQN+L +N+T D ILNY+NQLCD+LPSP GES+VDC +L+SMP +SFTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG
Sbjct:  261 KGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGP-MCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYG 499          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.302e-97
Identity = 168/240 (70.00%), Postives = 196/240 (81.67%), Query Frame = 1
Query:   16 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYG 735
            KGYWQF+MGDVL+ G++TG+C+ GC AIADSGTSLLAGPT IIT+IN  IGA+GV+SQECKT+V QYG+ IL++L+AETQP+KICSQ+GLCTFDGTRG S GI                   MCSACEMAV+WMQN+L +N+T D IL+YVNQLC+RLPSP GESAVDC +L SMP++ FTIGGK F L P EY+L+VGEG AAQCISGFTA D+ PPRGPLWILGDVFMG YHTVFDYG
Sbjct:  260 KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADP-MCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYG 498          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 6.689e-94
Identity = 161/241 (66.80%), Postives = 196/241 (81.33%), Query Frame = 1
Query:   16 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 738
            KGYWQFEMGDVLI  +TTG+C++GC AIADSGTSLLAG TTI+TQIN AIGA+GV+SQ+CK+LVDQYGK+++EML++E QP+KICSQM LC+FDG+   SM IE                   C  C   V+WMQN++R+NET + I+NYV++LC+RLPSP GESAVDC +LSSMPN++FT+GGK F+L+P +YVL+VGEG  AQCISGFTA DVAPP GPLWILGDVFMG+YHTVFDYGN
Sbjct:  227 KGYWQFEMGDVLIGDKTTGFCASGCAAIADSGTSLLAGTTTIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMR---CVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGN 464          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 7.163e-88
Identity = 148/240 (61.67%), Postives = 180/240 (75.00%), Query Frame = 1
Query:   16 KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIEXXXXXXXXXXXXXXXXXAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYG 735
            KGYWQF MGD+LIDG +TG+C+ GC AI DSGTSLLAGPT I+ Q+NHAIGA G+IS ECK +V +YG+ IL +LIA+T PQK+CSQ+GLC FDG R  S GIE                 AMCS CEMAV+W++N+LR N+T + ILNY NQLC+RLPSPNGES V C  +S MPN++FTI  K F L P +Y++++ +G    CISGF AFD+ PPRGPLWILGDVFMG YHTVFD+G
Sbjct:  253 KGYWQFNMGDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENLGSD------AMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFG 486          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 45/91 (49.45%), Postives = 58/91 (63.74%), Query Frame = 1
Query:  466 VNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 738
            +N+     P  NGE  VDC  +  +P +SF +GGK FDL   +YVL V +     C+SGF   D+ PP GPLWILGDVF+G+Y+T FD GN
Sbjct:  288 INKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGN 378          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  448 DQILNYVNQLCDRLPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 738
            +Q+ NY+      + + NGE  V C  LS MP+V+FTI G  + L P +Y+LE G G    C SGF   D++PP GPLWILGDVF+G+Y++VFD GN
Sbjct:  291 EQLQNYIG-----VTNTNGEYGVSCSTLSLMPSVTFTINGLDYSLTPEQYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGN 379          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.392e-20
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  487 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQ-CISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 738
            +P  NGE  V+C  + S+PN++F +GG+ FDL   +Y+L++  G     C+SGF   D+  P GPLWILGDVF+GR+++VFD+GN
Sbjct:  302 IPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGN 386          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.424e-19
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1
Query:  487 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFDYGN 738
            +P   GE  + C+ +SS+P V   +GGK ++L P++Y+L+V +G    C+SGF   D+ PP GPLWILGDVF+G Y+TVFD  N
Sbjct:  316 VPLIQGEYMIPCEKVSSLPTVYLKLGGKNYELHPDKYILKVSQGGKTICLSGFMGMDIPPPSGPLWILGDVFIGSYYTVFDRDN 399          
BLAST of CX301615 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  490 PSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGDVFMGRYHTVFD 729
            P   GE  V+CD + S+P +SFT+GG+V+ L   +Y+L+V +     C+SGF   D+  P GPLWILGDVFMG+Y+TVFD
Sbjct:  305 PLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFD 384          
The following BLAST results are available for this feature:
BLAST of CX301615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
ASPR_CUCPE3.312e-10170.00Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR1_ORYSJ2.009e-9870.00Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU1.302e-9770.00Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA6.689e-9466.80Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ7.163e-8861.67Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPP_AEDAE5.782e-2149.45Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATE_RANCA1.682e-2049.48Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
ASP3_CAEEL6.392e-2048.24Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
CATD_MOUSE1.424e-1948.81Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_CHIHA1.860e-1951.25Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC08011F11SK PhyRootSw1 Citrus sinensis cDNA clone C08011F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301615 ID=CX301615; Name=CX301615; organism=Citrus sinensis; type=EST; length=739bp
AATTCGGCACGAGGGAAAGGCTATTGGCAGTTTGAAATGGGTGATGTCCT
GATTGATGGTGAAACAACTGGATATTGTTCCACTGGTTGTAACGCAATTG
CTGATTCTGGAACCTCGTTGTTGGCGGGCCCAACAACCATAATTACACAA
ATTAATCATGCCATTGGAGCTTCTGGTGTCATAAGCCAAGAATGCAAGAC
TCTGGTTGACCAATATGGAAAAACCATATTGGAAATGCTGATAGCTGAGA
CACAACCACAAAAGATCTGCTCTCAGATGGGTCTATGTACTTTTGATGGG
ACTCGAGGTTTTAGCATGGGAATTGAGAGTGTCATAGATAAGAGCTCAGA
CAAGTCATCTGATGGTGTGCATGACTCTGCTATGTGCTCTGCTTGTGAGA
TGGCGGTCATATGGATGCAGAACAAGCTGAGGAGAAATGAGACAGCAGAT
CAAATCTTGAATTATGTAAATCAGCTTTGTGACCGTCTGCCCAGTCCAAA
TGGAGAATCAGCTGTTGATTGTGACAATTTATCTTCCATGCCCAATGTTT
CATTTACAATTGGTGGCAAAGTATTTGACCTTGCACCGAATGAGTATGTT
CTTGAAGTGGGAGAGGGAGTTGCAGCCCAATGCATCAGTGGATTTACTGC
TTTCGATGTGGCCCCTCCTCGTGGTCCTCTCTGGATTCTGGGAGATGTTT
TCATGGGTCGCTATCACACTGTGTTCGACTACGGCAACT
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