CN191795

Overview
NameCN191795
Unique NameCN191795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191795 vs. ExPASy Swiss-Prot
Match: DHQSD_ARATH (Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 35/56 (62.50%), Postives = 45/56 (80.36%), Query Frame = -3 
Query:  131 LFTPRKLPDSLREAEKSGASIVSGLEMFIGQAYEQYERFTGSPAPKDLFPKIMAKY 298
            ++TPR +   LREAE+SGA  VSG EMF+ QAYEQ+E FTG PAPK+L+ +IM+KY
Sbjct:  549 VYTPR-ITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 603
The following BLAST results are available for this feature:
BLAST of CN191795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHQSD_ARATH8.819e-1262.50Bifunctional 3-dehydroquinate dehydratase/shikimat... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005N14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191795 ID=CN191795; Name=CN191795; organism=Citrus sinensis; type=EST; length=366bp
TTAGAGGGTTCAAGTAAGACCTTTTATATTTTTAGTCAGATGAAAAAAAG
GAACAACGATGCTTCATGTTGAATTACGCTAGAAAACAGAATCAACAACA
TGTAATGGATTGACCAAACAGACCACACTAGTACTTTGCCATGATTTTCG
GAAATAGATCCTTCGGCGCAGGCGATCCAGTGAATCTTTCATACTGTTCG
TATGCCTGTCCAATGAACATCTCCAGCCCTGACACAATTGAGGCTCCAGA
TTTCTCTGCTTCTCTCAGAGAGTCTGGTAATTTTCGGGGTGTAAACAGCA
TCAAAGACCAGCGCATAATGTCCCAAAGCATGCTTCGGAATAGGTGTTTC
ATCAACTTTTGACTGC
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