CN191785

Overview
NameCN191785
Unique NameCN191785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191785 vs. ExPASy Swiss-Prot
Match: Y4598_ARATH (Uncharacterized membrane protein At4g06598 OS=Arabidopsis thaliana GN=At4g06598 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35
Identity = 89/204 (43.63%), Postives = 117/204 (57.35%), Query Frame = 1 
Query:   97 RSRFFNP----------PKGLVFALDMANSKGSSNIRNSLFTGKHALLPPKSPFPSISPAYSDYLPTGVIGPKAVQKPREGSVHHQRTSSESFLMEEQPSWLDDLLNEPETPVXXXXXXXXXXXXFAYIDLVNASNLDYAAQDESRYKHLVSVPSW--GPQDIDYHKDTRHSPFYAELNSLKLKNRAWDNPINALPHPGNLPSA 672
            +S FF+P          P   +  ++MA+SKGS N RN    GK ALLPPKSPF       +D++P+ VIG KAVQK  EG+ +H RTSSESFL+EEQPSWLDDLLNEPETPV            FAY+D+    ++DY   D  RY +     +   GP++ DY + ++  PFY   +  K K R WD    +LP  G  P++
Sbjct:  145 QSIFFSPFLVSILQISSPSRFIINIEMASSKGSQNHRNLGCNGKQALLPPKSPFTGGPTFSADFVPSSVIGSKAVQKLGEGNANHHRTSSESFLIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYVDVPVGFDVDYTLWDGGRYNNNNGFSNHVRGPKESDYLR-SQPVPFYPSAHLSKQKIRPWD----SLPDSGARPNS 343
The following BLAST results are available for this feature:
BLAST of CN191785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4598_ARATH1.450e-3543.63Uncharacterized membrane protein At4g06598 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005N08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191785 ID=CN191785; Name=CN191785; organism=Citrus sinensis; type=EST; length=748bp
GAGGCAAAAACGAAAGAGGGATTCTTCGGAATCACAATCAAAGCCTACAA
ATAAATAAAAAATCGAAACTTTCGATCACCCATTTGCATTTTTTCGAGAT
CTCGATTCTTCAATCCACCGAAGGGATTGGTTTTTGCTTTGGATATGGCA
AATTCAAAGGGATCATCAAACATCAGGAATTCGTTGTTCACTGGAAAGCA
TGCTTTACTTCCTCCTAAAAGTCCATTTCCGAGTATTTCCCCGGCATATA
GTGATTATCTCCCAACTGGTGTAATTGGACCGAAAGCAGTTCAAAAGCCC
CGAGAGGGAAGTGTACACCATCAACGTACTTCCTCGGAGAGCTTCCTAAT
GGAGGAGCAGCCTTCTTGGCTCGATGACCTCCTTAATGAGCCTGAGACAC
CTGTACGCAGAGGAGGTCATCGGCGCTCATCAAGTGATTCTTTTGCGTAC
ATAGATTTAGTCAATGCTTCTAACTTAGATTATGCAGCTCAAGACGAGTC
CAGATATAAACATTTGGTTTCTGTTCCTTCGTGGGGACCTCAAGATATTG
ATTATCACAAGGACACTCGACATTCCCCTTTCTATGCTGAATTGAACTCT
CTAAAGTTAAAGAATAGGGCATGGGACAATCCTATCAATGCTTTGCCTCA
TCCGGGTAACCTTCCTTCTGCCAGGGGAGATGTTGTTCTGCAGAATTTGG
GATCTCCAGCACAAGACGCAGATGGTGTTCCATCTACAACAAGTGAAA
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