CN191769

Overview
NameCN191769
Unique NameCN191769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = -3
Query:  216 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKNRE 509
            QT+C+A      K LQAA+D+ACG G ++C  IQ G +CY PN ++ HAS+AFNSYYQK+ R +GSCDF G A + T  P +G C FP    VG   +
Sbjct:  270 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQ 367          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.270e-22
Identity = 44/88 (50.00%), Postives = 59/88 (67.05%), Query Frame = -3
Query:  246 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFP 509
            QT+C+A      K LQAA+D+ACG G  DC  + +G +CY+P+ + AH++YAFN+YYQK  + +GSCDF G A V T  P  G C FP
Sbjct:  358 QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFP 445          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.214e-20
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = -3
Query:  222 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTGY*VGKN 509
            QT+C A   A  K LQAA+D+ACG G  DC PI++G TCY+P+ + AHA+YAF++YY +      +C+F G A + T  P +G C F      G+N
Sbjct:  366 QTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFAGSRGNGRN 461          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = -3
Query:  249 SPFVSTSGNS---SSTPAANKSKTQXXXXXXXXXXXXXXXXGQTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 626
            SP  ST+G S   SS+P  N + T                  + WC+A++ A   +LQ A+D+ACG G  DC  +Q    C++P+T+ +HASYAFN+YYQ+    +  C F GA+  V + P YG C +
Sbjct:  354 SPTNSTTGTSPSPSSSPIINGNST-------VTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -3
Query:  243 QTWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 509
            + WCVA  NA +  LQ AI++ACG+GGADC PIQ+G  C DP  ++  AS+ FN+YY K   +  +C+F   A + +  P  G C++P+
Sbjct:   39 ELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPS 127          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = -3
Query:  243 TWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 506
            +WC+A++ A E+ L+ A+D+ACG G  DC  IQ    C+ P+TL +HAS+ FNSY+Q+      +C FGGA   V + P Y KC + T
Sbjct:  368 SWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYIT 455          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = -3
Query:  249 WCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 503
            +CVA A+A + KL   +++ACG+G A+C  IQ G  CY PN +++HAS+AFN YYQK     G+CDF G A   T+ P Y  C +
Sbjct:  362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.535e-18
Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = -3
Query:  240 WCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPTG 503
            WCV    A  ++LQA++D+ACG G  DC  IQ G  C++PN + +HA+YA N Y+QK  ++   CDF   A V +Q P Y  C +P G
Sbjct:  364 WCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGG 450          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.992e-17
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  243 TWCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQFPT 506
            +WCV      +  LQA +DYACG G ADC P +   +C++P+ + +H +YA NS++QK+ +  GSC+F G A      P Y  C FPT
Sbjct:   20 SWCVCKTGLSDTVLQATLDYACGNG-ADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPT 106          
BLAST of CN191769 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.992e-17
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = -3
Query:  249 WCVANANAGEKKLQAAIDYACGEGGADCRPIQEGATCYDPNTLEAHASYAFNSYYQKQVRKAGSCDFGGAAYVVTQAPKYGKCQF 503
            WCVA   A    LQ  I+YACG    DC+PIQ G  C+ PN+L+AHASY  N+YYQ       +CDF G   V +  P YG C++
Sbjct:  377 WCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
The following BLAST results are available for this feature:
BLAST of CN191769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
E131_ARATH5.630e-2450.00Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E133_ARATH5.270e-2250.00Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E132_ARATH2.214e-2044.79Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E1312_ARATH2.448e-1937.21Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13L1_ARATH7.122e-1943.82Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]
E1313_ARATH7.122e-1944.32Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E134_ARATH1.215e-1847.06Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E137_ARATH3.535e-1844.32Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13L2_ARATH2.992e-1742.05Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
E13B_WHEAT2.992e-1747.06Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M17_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191769 ID=CN191769; Name=CN191769; organism=Citrus sinensis; type=EST; length=643bp
ATCATTTAGAATAAATACAANTAAGGATTTGATCATATTGACACTAGAGT
CAAACCAACTGATAACAACCGCACCCACTCAGCGTACTAGTATATAAAAT
TTAAATACAAGGGAGAAAAATTAATGTTCCAATCGTCTAAATCTATCAGA
AAAAATCATCACCAATCGTAAGCCGCGAGAAAGCTCCAAATCTGCAGACC
ACAAATCAGCTAATGCTCCCTATTTTTTCCCACTCAATAGCCAGTTGGGA
ACTGGCATTTTCCATATTTAGGAGCCTGCGTGACCACGTAGGCCGCACCA
CCAAAATCACAAGATCCAGCCTTACGCACTTGCTTCTGATAATAACTATT
GAAGGCATACGATGCATGGGCTTCTAACGTGTTAGGATCGTAACACGTGG
CGCCCTCTTGAATCGGACGGCAATCAGCGCCTCCCTCGCCGCAGGCATAA
TCAATTGCGGCTTGCAACTTTTTCTCACCAGCATTCGCGTTAGCCACGCA
CCAAGTCTGTCCCGCCGCCGAGGGCGACACGTCACCACCGCCTCCTCCGC
TCACCGGAACTTGAGTCTTGCTCTTATTGGCTGCCGGCGTTGAGCTTGAG
TTCCCACTAGTTGACACAAACGGCGAGTCGTACACCGTCTCCT
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