CN191766

Overview
NameCN191766
Unique NameCN191766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.278e-48
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = -1
Query:  335 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 640
            QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVE AY+RA QIITTHIDILHKLAQLL+EKETVDGEEFMSLFIDG+AELFVA
Sbjct:  585 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEFMSLFIDGQAELFVA 686          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.377e-46
Identity = 90/102 (88.24%), Postives = 99/102 (97.06%), Query Frame = -1
Query:  335 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 640
            QM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMATAD+VDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+++
Sbjct:  615 QMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS 716          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.523e-45
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = -1
Query:  335 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 640
            QMVER GFSKKIGQVAIGG GGNPFLGQQMS+QKDYSMATADVVDAEVRELVE AY RA +IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+++
Sbjct:  606 QMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYIS 707          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.523e-45
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = -1
Query:  335 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 640
            QMVERFGFSKKIGQVA+GG GGNPFLGQ MSSQKDYSMATADVVDAEVRELVE AY RAK+IITT IDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL+V+
Sbjct:  603 QMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVS 704          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.989e-45
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = -1
Query:  335 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELFVA 640
            QMVERFGFSKKIGQVAIGG GGNPFLGQQMSSQKDYSMATAD+VD EVRELV+ AY RA QII THIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL+V+
Sbjct:  605 QMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS 706          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.063e-34
Identity = 74/80 (92.50%), Postives = 76/80 (95.00%), Query Frame = -1
Query:  401 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEK 640
            QMVER GFSKKIGQVAIGG GGNPFLGQQMS+QKDYSMATADVVD+EVRELVE AY RAKQIITTHIDILHKLAQLLIEK
Sbjct:  583 QMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.892e-20
Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = -1
Query:  344 QMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 640
            QMV RFG S ++G VA+G  GG  FLG+ ++S +D+S  TA  +D EV +LV+ AY RAKQ++  +  IL +LA++L+EKETVD EE  +L  +  A+L
Sbjct:  514 QMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNAKL 612          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTU (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  359 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 637
            MV  FG S K+G V  G   G+PFLG+ M +Q DYS   A  +D EVR+L+E A+T A +I+T + D+L  LA  L+EKET+   E  S+F D
Sbjct:  512 MVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_MYCTA (Cell division protease ftsH homolog OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  359 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 637
            MV  FG S K+G V  G   G+PFLG+ M +Q DYS   A  +D EVR+L+E A+T A +I+T + D+L  LA  L+EKET+   E  S+F D
Sbjct:  512 MVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604          
BLAST of CN191766 vs. ExPASy Swiss-Prot
Match: FTSH_MYCBO (Cell division protease ftsH homolog OS=Mycobacterium bovis GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.533e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  359 MVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 637
            MV  FG S K+G V  G   G+PFLG+ M +Q DYS   A  +D EVR+L+E A+T A +I+T + D+L  LA  L+EKET+   E  S+F D
Sbjct:  512 MVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604          
The following BLAST results are available for this feature:
BLAST of CN191766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
FTSH1_ORYSJ3.278e-4895.10Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH1_ARATH1.377e-4688.24Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_TOBAC1.523e-4590.20Cell division protease ftsH homolog, chloroplastic... [more]
FTSH5_ARATH1.523e-4590.20Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_MEDSA1.989e-4590.20Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_CAPAN2.063e-3492.50Cell division protease ftsH homolog, chloroplastic... [more]
FTSH4_SYNY32.892e-2048.48Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH_MYCTU2.533e-1647.31Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCTA2.533e-1647.31Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH_MYCBO2.533e-1647.31Cell division protease ftsH homolog OS=Mycobacteri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M15_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191766 ID=CN191766; Name=CN191766; organism=Citrus sinensis; type=EST; length=640bp
GAGGAGGACTTGCACATTTGAAACGTCAAAATCAGAAAGAATGTGCTAGT
AATCGATCTTCCTAACGTATGATCTAAAACAATCACGAGTGTGAGGAACT
ATTAAGTTTGAAGTTTCATTTACAGGAATGCAGATACAAATCTTGGTGGT
TTTGATTAAAAAGGCTGATCTTGGCTTGGCTTGGCTTCCTCATTAGGCGT
AGCCAAGTAGATAAAGCTGTAACACAAATCCTCCTAAAAACCTCCCCATA
TTTCTAAAATGATAATTTAATTACTTGATTTTACATGGGCATATACAACA
CGAATCTGAATTCTGATTCTTTCATGTACAATCAGGCAACAAATAGCTCA
GCTTTTCCATCAATGAAAAGGCTCATAAATTCTTCTCCATCAACGGTTTC
TTTCTCTATGAGGAGTTGAGCAAGCTTGTGAAGGATGTCAATGTGGGTTG
TGATGATCTGCTTGGCCCTTGTATATGCTGTTTCAACCAATTCTCTGACC
TCTGCATCCACCACATCGGCAGTTGCCATGGAGTAGTCTTTCTGAGAAGA
CATTTGTTGACCCAAGAATGGATTTCCACCAGGTCCTCCAATGGCAACTT
GTCCAATTTTCTTGCTAAACCCAAATCTTTCAACCATCTG
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