CN191765

Overview
NameCN191765
Unique NameCN191765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191765 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.185e-49
Identity = 81/131 (61.83%), Postives = 98/131 (74.81%), Query Frame = -3
Query:  273 WGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 665
            WGE+GY+RMERN+  + +GKCGIA+E SY                     P VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  315 WGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of CN191765 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.673e-48
Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = -3
Query:  252 WGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 665
            WGE+GY+RM RN+A + +GKCGIA+E SY                     P  CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  323 WGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of CN191765 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 74/143 (51.75%), Postives = 91/143 (63.64%), Query Frame = -3
Query:  249 WG----EAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 665
            WG    E GY+R++RNV+ + +G CG+A+E SY                     P  CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  200 WGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of CN191765 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.527e-38
Identity = 73/136 (53.68%), Postives = 86/136 (63.24%), Query Frame = -3
Query:  276 WGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 665
            WGE+GY+RMERN+  T TGKCGIAM ASY                     P       VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  328 WGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of CN191765 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.969e-31
Identity = 63/135 (46.67%), Postives = 73/135 (54.07%), Query Frame = -3
Query:  273 WGEAGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXPAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 665
            WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  345 WGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
The following BLAST results are available for this feature:
BLAST of CN191765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ORYA_ORYSJ9.185e-4961.83Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH2.673e-4857.25Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC2.679e-4051.75Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ9.527e-3853.68Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ2.969e-3146.67Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M13_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191765 ID=CN191765; Name=CN191765; organism=Citrus sinensis; type=EST; length=667bp
CAACAATTTGTTTGTGCATTGTTCAAATTCAACGCAGATAGATAACTTAC
AACGCTATATACCAAACCAACGTCCGAATAAATATTTAACAGACCATCCA
CCTGCCGGTACATTAACGTTTGGAATGAAATGCAGTAGAATGAACTAAGG
CCGGGGAGAAACTCATTCACAAGCACGAATATTTTCATCCTCCCTTCGGC
CTTCCACTGCTCTTACAGTGCCAACTATAATTAAGCACTGCTACTTCCAC
CTTGATTTCCATGAGCCCAGTAAGGTTTAGCAGGGGTGCGTCGTAATGCC
CTCACTCCCAATGGGTTGTCCTTGCTCATCAAGCAGGTCCCAGCACGAAC
ATTACAGATGGGATAGTCATGTGGGCAGCAGCTATAGTGGTCATCACAGC
AGGTGGCAGCCTCAAGCGGGCAGCATCCCCATGCAAAGCAAGAGTTACCA
TACTCAAAGACACAGCAGCAAGTGTTGCTCTCAGGGCAAGAGTAATAATT
GTCACACACAGCAGGAGGCTTTGTTGGAGATGGAGGGGACGGTCCAGGGT
TGGGAGGATTTTGGCCTTTCTTTATGGGATATGAGGCCTCCATGGCAATT
CCACACTTGCCCGTGAGAGTGCCAGCCACGTTACGCTCCATCCTAATATA
GCCAGCCTCTCCCCAGC
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