CN191761

Overview
NameCN191761
Unique NameCN191761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length545
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191761 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.573e-12
Identity = 41/138 (29.71%), Postives = 72/138 (52.17%), Query Frame = -1 
Query:  123 VILSISACL--GVICWILCLIFGRQISYLFTTSEEIAEEXXXXXXXXXXXXXXXXVQPVLSGVAVGAGMQSTVAFVNLGSYYFVGVPTGVLLAYVANXXXXXXXXXXXXXXXIQTIILSFIIWRTDWDDQVNKASQRL 530
            V+++I+  L   V+C ++ L+F   +S  FT+  E+                   +QP+LSGVA+G+G Q+ VA+VNL +YY +G+P G +L +  +               +QT+ L  +  +T+W  +V  A+QR+
Sbjct:  356 VVVNITTVLISSVLC-VIVLVFRVGLSKAFTSDAEVIAAVSDLFPLLAVSIFLNGIQPILSGVAIGSGWQAVVAYVNLVTYYVIGLPIGCVLGFKTSLGVAGIWWGMIAGVILQTLTLIVLTLKTNWTSEVENAAQRV 492
The following BLAST results are available for this feature:
BLAST of CN191761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TT12_ARATH1.573e-1229.71Protein TRANSPARENT TESTA 12 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M10_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191761 ID=CN191761; Name=CN191761; organism=Citrus sinensis; type=EST; length=545bp
GAGGATTATTCTACTGATAGGCCCAACCGACAAATATTCTTGTGCAAGTA
ATGAATTACACAACTCTACATATTTGGAGAGCTTCGATCAGATTTTTCAG
ATGGTTTCAGCAACCATTTGTTGAGACGTTGGGATGCCTTGTTCACCTGA
TCATCCCAATCTGTCCTCCATATGATGAAGGAAAGAATAATGGTTTGAAT
AACAATTCCACCCAACAATCCAATCCATAAACCCGTAACTCCGAGATTGG
CCACATATGCAAGCAAAACTCCTGTAGGAACTCCAACAAAGTAATAGCTT
CCCAAGTTAACAAATGCAACCGTGCTTTGCATTCCAGCACCTACAGCTAC
CCCTGAGAGTACTGGCTGAACGCTGTTAAGCAAAAGGGAGAAAGAAAGCA
GAACAGATAGTTTCGATACTTCTTCTGCAATTTCCTCACTAGTTGTAAAC
AGGTATGAAATCTGACGGCCAAAGATTAAACATAAAATCCAACAGATCAC
TCCAAGACAGGCTGAAATAGAGAGTATGACTTTAATGGAAAATTT
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