CN191742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.489e-50 Identity = 91/101 (90.10%), Postives = 99/101 (98.02%), Query Frame = -2 Query: 546 NLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNI 848 NLLIGFLSPLVDPE+EV+DG LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFFSVFDVPVFWPILLCYW+VLFVLTMRRQIAHMIK++YIPF+I Sbjct: 74 NLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSI 174
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.791e-49 Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = -2 Query: 549 NLLIGFLSPLVDPEIE-VADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 848 NLLIGFLSPLVDPE V+DGP LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF+ Sbjct: 74 NLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS 174
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.176e-37 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = -2 Query: 549 NLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 848 NL+I FLSP DPE + G LPT+ SDE++PF+RRLPEFKFW S+ +AF I F+MTFF VFDVPVFWPILL YW++LF LTMR+QI HMIKYRY+PF+ Sbjct: 96 NLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFS 195
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 66/101 (65.35%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 66/101 (65.35%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.161e-33 Identity = 66/101 (65.35%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33 Identity = 65/101 (64.36%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.822e-33 Identity = 65/101 (64.36%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.287e-33 Identity = 65/101 (64.36%), Postives = 79/101 (78.22%), Query Frame = -2 Query: 552 NLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 848 NL I FLSP VDP + + DGP LPT+ ++EF+PFIRRLPEFKFW+S TK +A TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 77 NLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of CN191742 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.078e-32 Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = -2 Query: 546 NLLIGFLSPLVDPEIEVAD---GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNI 848 NL + FL+P +DP +E D GP+LP+K +DEF+PF+RRLPEFKFW+S KA IA TFF FDVPVFWPIL+ Y+ +L LT++RQI HMIKYRYIPF + Sbjct: 71 NLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTV 174 The following BLAST results are available for this feature:
BLAST of CN191742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CN191742 ID=CN191742; Name=CN191742; organism=Citrus sinensis; type=EST; length=849bpback to top |