CN191708

Overview
NameCN191708
Unique NameCN191708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_DICDI (Protein fat-free homolog OS=Dictyostelium discoideum GN=ffr PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.342e-25
Identity = 58/154 (37.66%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  166 KAKRMRDLLSSFYAPDPSMPNESSGKYVPLDAIDTNSFDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            ++KR+R+LL ++Y P     ++SS    PL+ ID  SF+ + Y + +V+ S+L  L+Q+  +M +EI+ LD D++ LVY+NY+KFI+ATD IK+M +N+  ME  M  L + +  + + S+ +N++LS +R+ I++L   +   +K+QF+  LP
Sbjct:  147 ESKRVRNLLKTYYGPGIGEGSDSSSMNDPLN-IDGPSFNLNSYFDSIVKSSTLNQLIQKDNQMVSEIRTLDGDMKTLVYDNYTKFINATDIIKKMKTNVENMEEGMALLSKNMDLITNCSEKINSTLSVRRDRIDQLSGLQKFFQKLQFLTALP 299          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_MOUSE (Protein fat-free homolog OS=Mus musculus GN=Ffr PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20
Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 1
Query:  250 PLDAIDTNS--FDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            PLD  D N   FD + Y++ L ++  L  L+    +M  +I+ LD+D+Q LVYENY+KFISATDTI++M ++   ME  M++L   +  + + S  ++ +L ++ E I KL     LLRK+QF+++LP
Sbjct:   57 PLDPTDLNGAHFDPEVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFRKMEDEMDRLATNMAVITNFSARISATLQDRHERITKLAGVHALLRKLQFLFELP 184          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_HUMAN (Protein fat-free homolog OS=Homo sapiens GN=FFR PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = 1
Query:  250 PLDAIDTNS--FDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            PLD  D N   FD + Y++ L ++  L  L+    +M  +I+ LD+D+Q LVYENY+KFISATDTI++M ++   ME  M++L   +  +   S  ++ +L ++ E I KL     LLRK+QF+++LP
Sbjct:   57 PLDPTDLNGAHFDPEVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFRKMEDEMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLFELP 184          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_DANRE (Protein fat-free OS=Danio rerio GN=ffr PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 58/162 (35.80%), Postives = 94/162 (58.02%), Query Frame = 1
Query:  154 PLDDKAKRMR--DLLSSFYAPDPSMPNESSGKYVPLDAIDTNS--FDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            P  D A+R R   +L  +Y  +     +++ +   LD  D N   FD + Y+N L ++ SL  L+     M  +I++LD+D+Q LVYENY+KFISATDTI++M ++   ME  M+ L   + ++   S  ++ +L ++   I KL     LLRK+QF+++LP
Sbjct:    8 PDSDPAQRRRVHSMLKLYYGLNEE--GKATEQAESLDPCDINGPHFDPEIYLNKLRKECSLTELMDHESCMVKQIRSLDSDMQTLVYENYNKFISATDTIRKMKNDFKKMEDEMDCLSANMAAITEFSARISGTLQDQHAQITKLSGVHTLLRKLQFLFELP 167          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_XENTR (Protein fat-free homolog OS=Xenopus tropicalis GN=ffr PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19
Identity = 47/122 (38.52%), Postives = 79/122 (64.75%), Query Frame = 1
Query:  262 IDTNSFDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            +D   F+ + Y+  L ++SSL  L+    +M  +I++LD+++Q LVYENY+KFISATDTI++M ++   ME  M+ L   +  +   S  ++++L E+ + I KL     LLRK+QF+++LP
Sbjct:   44 VDGVHFNPELYLTKLRKESSLSQLMDVEADMVRQIRSLDSEMQTLVYENYNKFISATDTIRKMKNDFKKMEDEMDGLATNMAVITEFSARISSTLQERHQQITKLSGVHTLLRKLQFLFELP 165          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_DROME (Protein fat-free homolog OS=Drosophila melanogaster GN=CG15087 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.010e-19
Identity = 47/126 (37.30%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  250 PLDAIDTNSFDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            P D +D++SFDA++Y+  L++  SL+ ++     +  + + L +D+Q LVYENY+KFISATDTI+RM  +   ME ++  L+ K++S+ + S+ +  +L   R  + +L  K +LL+++QF+  LP
Sbjct:    8 PFD-MDSSSFDAEKYLERLLKDCSLKQIMDTEAAVVKDTQTLHSDMQTLVYENYNKFISATDTIRRMKDDFKQMETDVNLLMTKMQSITTFSEQITGTLQGTRSQLCRLSEKHSLLKRLQFLSTLP 132          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_XENLA (Protein fat-free homolog OS=Xenopus laevis GN=ffr PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19
Identity = 50/154 (32.47%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  166 KAKRMRDLLSSFYAPDPSMPNESSGKYVPLDAIDTNSFDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            K K+   +L  +Y        +++ +++    +D   F+ + Y+  L ++SSL  L+    +M  +I++LD+++Q LVYENY+KFISATDTI++M ++   ME  M+ L   +  +   S  ++++L    + I KL     LLRK+QF+++LP
Sbjct:   11 KKKKSHGILKLYYGMTEE--GKAAERHLEPTDVDGVHFNPELYLTKLRKESSLSQLMDVEADMVRQIRSLDSEMQTLVYENYNKFISATDTIRKMKNDFKKMEDEMDGLASNMAVITEFSARISSTLQVSHQQITKLSGVHTLLRKLQFLFELP 162          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_BOVIN (Protein fat-free homolog OS=Bos taurus GN=FFR PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19
Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  250 PLDAIDTNS--FDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            PLD  D N   FD + Y++ L ++  L  L+    +M  +I+ LD+D+Q LVYENY+KFISATDTI++M ++   ME  M++L   +  +   S  ++ +L +  E I KL     LLRK+Q +++LP
Sbjct:   56 PLDPTDLNGAHFDPEVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTIRKMKNDFRKMEDEMDRLATNMAVITDFSARISATLQDPHERITKLAGVHALLRKLQILFELP 183          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_CHICK (Protein fat-free homolog OS=Gallus gallus GN=FFR PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  172 KRMRDLLSSFYAPDPSMPNESSGKYVPLDAIDTNSFDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            +R    L  +Y P  +   E++    P D I+   FD + ++  +  +  L  LL R   +  EI+ LD+D+Q L+YENY+KFISATDTI++M  +   MEA M+ L   + ++ + S  V+ +L ++     +L   + LLRK+Q + ++P
Sbjct:   30 RRPHGPLQRYYGPSAAEAAEATPD--PAD-INGPHFDPEVFLTKVRSECRLGELLSREATLGREIRALDSDMQTLLYENYNKFISATDTIRKMKVDFRRMEAEMDDLASNMAAISASSARVSAALQDRHRRGAQLAGVQALLRKLQSLVEVP 178          
BLAST of CN191708 vs. ExPASy Swiss-Prot
Match: FFR_CAEEL (Protein fat-free homolog OS=Caenorhabditis elegans GN=B0414.8 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.588e-15
Identity = 34/117 (29.06%), Postives = 74/117 (63.25%), Query Frame = 1
Query:  277 FDADQYMNLLVQKSSLEGLLQRHVEMAAEIKNLDTDLQMLVYENYSKFISATDTIKRMNSNIVGMEANMEQLLEKIKSVQSRSDGVNTSLSEKREHIEKLHCKRNLLRKVQFIYDLP 627
            FD + ++  L+++ SL+GL++   EM + ++ LD+D+  +VYENY+KF++AT+T++++      +++ M+ L   + ++ +    ++  L EKR+ I +L     ++  ++ I+DLP
Sbjct:   12 FDVEAFVVKLLREKSLDGLVKEEEEMVSAVRRLDSDVHQIVYENYNKFLTATNTVRKIQDEFTQLDSEMKSLSRSMSTISTLIGNLDGVLGEKRDDILQLGSSYKVVNSLKHIFDLP 128          
The following BLAST results are available for this feature:
BLAST of CN191708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FFR_DICDI8.342e-2537.66Protein fat-free homolog OS=Dictyostelium discoide... [more]
FFR_MOUSE4.737e-2039.84Protein fat-free homolog OS=Mus musculus GN=Ffr PE... [more]
FFR_HUMAN6.187e-2039.84Protein fat-free homolog OS=Homo sapiens GN=FFR PE... [more]
FFR_DANRE2.351e-1935.80Protein fat-free OS=Danio rerio GN=ffr PE=2 SV=1[more]
FFR_XENTR3.070e-1938.52Protein fat-free homolog OS=Xenopus tropicalis GN=... [more]
FFR_DROME4.010e-1937.30Protein fat-free homolog OS=Drosophila melanogaste... [more]
FFR_XENLA6.840e-1932.47Protein fat-free homolog OS=Xenopus laevis GN=ffr ... [more]
FFR_BOVIN6.840e-1939.06Protein fat-free homolog OS=Bos taurus GN=FFR PE=2... [more]
FFR_CHICK5.420e-1632.89Protein fat-free homolog OS=Gallus gallus GN=FFR P... [more]
FFR_CAEEL4.588e-1529.06Protein fat-free homolog OS=Caenorhabditis elegans... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005K23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191708 ID=CN191708; Name=CN191708; organism=Citrus sinensis; type=EST; length=629bp
GAGGTTTCGCTTTTCAACTTCTTCTACCAAGTGAATTCAGCCAATTGATT
TTGGTTTTGTTCGATCCCGTAGAAATTTGATTTTTAGAGTAAGTAGTTTA
GTTAGTGATAATATAGTGGAAACTCTGTGGAGAAAATGGCCGTGGACGAC
GTTCCGTTGGATGACAAAGCAAAGAGAATGAGAGATCTGCTGTCGAGCTT
CTACGCTCCCGATCCTTCCATGCCCAATGAATCTTCTGGGAAATACGTAC
CGTTAGATGCAATCGACACCAATTCATTCGATGCTGATCAATACATGAAT
CTCCTGGTACAAAAGTCGAGTTTGGAAGGGCTTCTGCAGAGGCATGTTGA
AATGGCTGCTGAGATAAAAAATCTTGATACTGACTTGCAGATGTTAGTCT
ATGAAAATTACAGCAAGTTTATCAGCGCCACTGACACAATCAAAAGGATG
AATAGTAATATTGTGGGCATGGAAGCGAATATGGAACAACTCCTTGAGAA
GATAAAGTCAGTGCAATCTAGAAGTGACGGGGTCAACACTTCTCTTTCTG
AAAAGAGAGAACATATAGAGAAATTACATTGCAAGCGCAACCTTCTGCGG
AAAGTTCAGTTCATTTATGATTTACCTGC
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